Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF9BB2RNN3 NBPF21P-201ENST00000425093 1451 ntBASIC19.27■□□□□ 0.67
C1QTNF9BB2RNN3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
C1QTNF9BB2RNN3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
C1QTNF9BB2RNN3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 AP002982.1-201ENST00000492365 877 ntBASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
C1QTNF9BB2RNN3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 MYC-208ENST00000641036 567 ntBASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C1QTNF9BB2RNN3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 AC003102.1-202ENST00000563394 1796 ntBASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 AC093458.2-201ENST00000623150 629 ntBASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C1QTNF9BB2RNN3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 ECEL1P2-202ENST00000465689 757 ntBASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
C1QTNF9BB2RNN3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 BX664615.1-201ENST00000443558 458 ntBASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.22■□□□□ 0.67
C1QTNF9BB2RNN3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms