Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 REXO1L12P-201ENST00000622156 912 ntBASIC26.81■■□□□ 1.88
SPG7Q9UQ90 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPG7Q9UQ90 AC012676.1-201ENST00000574705 1949 ntBASIC26.8■■□□□ 1.88
SPG7Q9UQ90 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 KRASP1-201ENST00000407852 552 ntBASIC26.8■■□□□ 1.88
SPG7Q9UQ90 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.8■■□□□ 1.88
SPG7Q9UQ90 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 ECEL1P3-201ENST00000427961 737 ntBASIC26.79■■□□□ 1.88
SPG7Q9UQ90 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.79■■□□□ 1.88
SPG7Q9UQ90 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 AP001412.1-201ENST00000608405 714 ntBASIC26.78■■□□□ 1.88
SPG7Q9UQ90 AL049637.2-201ENST00000641778 930 ntBASIC26.78■■□□□ 1.88
SPG7Q9UQ90 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 AL135905.2-201ENST00000584934 1404 ntBASIC26.78■■□□□ 1.88
SPG7Q9UQ90 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPG7Q9UQ90 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 ECEL1P1-201ENST00000373592 1742 ntBASIC26.77■■□□□ 1.88
SPG7Q9UQ90 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 KRT17P2-201ENST00000300992 1314 ntBASIC26.77■■□□□ 1.88
SPG7Q9UQ90 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 AC211429.1-201ENST00000415277 523 ntBASIC26.77■■□□□ 1.88
SPG7Q9UQ90 TSPY7P-201ENST00000431358 1114 ntBASIC26.77■■□□□ 1.88
SPG7Q9UQ90 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
SPG7Q9UQ90 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.76■■□□□ 1.88
SPG7Q9UQ90 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
SPG7Q9UQ90 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
SPG7Q9UQ90 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms