Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KLHL1Q9NR64 AC073130.3-201ENST00000624389 2278 ntBASIC19.14■□□□□ 0.66
KLHL1Q9NR64 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
KLHL1Q9NR64 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KLHL1Q9NR64 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KLHL1Q9NR64 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KLHL1Q9NR64 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 BX276092.2-201ENST00000417668 665 ntBASIC19.14■□□□□ 0.65
KLHL1Q9NR64 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KLHL1Q9NR64 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KLHL1Q9NR64 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.12■□□□□ 0.65
KLHL1Q9NR64 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 AC243732.1-201ENST00000612648 864 ntBASIC19.12■□□□□ 0.65
KLHL1Q9NR64 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KLHL1Q9NR64 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 AL512625.2-201ENST00000417533 625 ntBASIC19.11■□□□□ 0.65
KLHL1Q9NR64 AC073210.2-201ENST00000430369 194 ntBASIC19.11■□□□□ 0.65
KLHL1Q9NR64 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 MIR4651-201ENST00000582622 73 ntBASIC19.11■□□□□ 0.65
KLHL1Q9NR64 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHL1Q9NR64 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 AC245052.3-201ENST00000450182 901 ntBASIC19.1■□□□□ 0.65
KLHL1Q9NR64 RNA5SP413-201ENST00000516373 109 ntBASIC19.1■□□□□ 0.65
KLHL1Q9NR64 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 TMEM191A-211ENST00000637163 1067 ntBASIC19.1■□□□□ 0.65
KLHL1Q9NR64 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL1Q9NR64 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms