Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 AC116050.2-201ENST00000612102 1779 ntBASIC14.16□□□□□ -0.14
UPK3BQ9BT76 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK3BQ9BT76 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.15□□□□□ -0.14
UPK3BQ9BT76 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK3BQ9BT76 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 MCRIP2P1-201ENST00000394346 511 ntBASIC14.14□□□□□ -0.15
UPK3BQ9BT76 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 BX276092.2-201ENST00000417668 665 ntBASIC14.14□□□□□ -0.15
UPK3BQ9BT76 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UPK3BQ9BT76 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms