Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 POU5F1P4-201ENST00000413175 1085 ntBASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 KRT18P5-201ENST00000436075 1291 ntBASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AC008175.2-201ENST00000612840 297 ntBASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 AC004854.2-201ENST00000608450 1441 ntBASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CCHCR1Q8TD31 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 AC061975.6-201ENST00000579045 1553 ntBASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCHCR1Q8TD31 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCHCR1Q8TD31 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCHCR1Q8TD31 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 AC104187.1-201ENST00000607510 612 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms