Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NSMCE4A-211ENST00000489266 2399 ntTSL 1 (best)17.02■□□□□ 0.329e-7■■■□□ 15.2
SRSF1Q07955 NSMCE4A-205ENST00000465189 440 ntTSL 516.42■□□□□ 0.229e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-215ENST00000450019 1689 ntTSL 520.02■□□□□ 0.81e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.73■□□□□ 0.751e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.58■□□□□ 0.731e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.55■□□□□ 0.721e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.18■□□□□ 0.51e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.11■□□□□ 0.491e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.391e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.39■□□□□ 0.371e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.94■□□□□ 0.141e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-203ENST00000399807 2241 ntTSL 515.27■□□□□ 0.041e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.54□□□□□ -0.241e-7■■■□□ 15.2
SRSF1Q07955 TANGO2-213ENST00000444651 847 ntTSL 313.39□□□□□ -0.271e-7■■■□□ 15.2
SRSF1Q07955 MARS-216ENST00000549048 755 ntTSL 315.25■□□□□ 0.033e-16■■■□□ 15.2
SRSF1Q07955 MARS-212ENST00000548630 557 ntTSL 215.07■□□□□ 03e-16■■■□□ 15.2
SRSF1Q07955 C22orf34-205ENST00000416411 542 ntTSL 412.45□□□□□ -0.424e-6■■■□□ 15.2
SRSF1Q07955 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.58□□□□□ -0.564e-6■■■□□ 15.2
SRSF1Q07955 MYO18B-203ENST00000418374 6363 ntTSL 1 (best)10.96□□□□□ -0.651e-8■■■□□ 15.2
SRSF1Q07955 AKAP9-211ENST00000487258 3983 ntTSL 27.66□□□□□ -1.181e-8■■■□□ 15.2
SRSF1Q07955 AKAP9-204ENST00000394534 5652 ntAPPRIS ALT2 TSL 1 (best)4.7□□□□□ -1.661e-8■■■□□ 15.2
SRSF1Q07955 CDK5RAP3-207ENST00000578134 831 ntTSL 314.51□□□□□ -0.095e-7■■■□□ 15.2
SRSF1Q07955 CDK5RAP3-227ENST00000583352 901 ntTSL 39.58□□□□□ -0.885e-7■■■□□ 15.2
SRSF1Q07955 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.72□□□□□ -1.333e-7■■■□□ 15.2
SRSF1Q07955 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.18□□□□□ -1.583e-7■■■□□ 15.2
SRSF1Q07955 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.623e-7■■■□□ 15.2
SRSF1Q07955 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)3.63□□□□□ -1.833e-7■■■□□ 15.2
SRSF1Q07955 CCAR1-211ENST00000539539 3224 ntTSL 23.52□□□□□ -1.853e-7■■■□□ 15.2
SRSF1Q07955 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.431e-9■■■□□ 15.1
SRSF1Q07955 SEC63-204ENST00000459782 2025 ntTSL 1 (best)4.93□□□□□ -1.621e-9■■■□□ 15.1
SRSF1Q07955 SRRT-204ENST00000448764 1607 ntTSL 514.12□□□□□ -0.157e-7■■■□□ 15.1
SRSF1Q07955 SRRT-211ENST00000478693 655 ntTSL 210.2□□□□□ -0.787e-7■■■□□ 15.1
SRSF1Q07955 SRRT-208ENST00000469602 376 ntTSL 28.99□□□□□ -0.977e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-212ENST00000564050 846 ntTSL 515.63■□□□□ 0.094e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-214ENST00000565356 1723 ntTSL 515.23■□□□□ 0.035e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.91□□□□□ -0.55e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.595e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.725e-7■■■□□ 15.1
SRSF1Q07955 PRMT7-225ENST00000568975 2996 ntTSL 28.69□□□□□ -1.025e-7■■■□□ 15.1
SRSF1Q07955 NSUN5P1-207ENST00000464979 529 ntTSL 55.83□□□□□ -1.485e-11■■■□□ 15.1
SRSF1Q07955 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.59□□□□□ -0.231e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-206ENST00000561633 603 ntTSL 1 (best)13.5□□□□□ -0.251e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-207ENST00000561721 637 ntTSL 212.6□□□□□ -0.391e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-209ENST00000564509 806 ntTSL 1 (best)12.39□□□□□ -0.431e-6■■■□□ 15.1
SRSF1Q07955 SNHG20-205ENST00000568363 786 ntTSL 1 (best)12.2□□□□□ -0.461e-6■■■□□ 15.1
SRSF1Q07955 SNHG20-203ENST00000565256 1234 ntTSL 1 (best)12.16□□□□□ -0.461e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-211ENST00000569632 377 ntTSL 1 (best)11.29□□□□□ -0.61e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-224ENST00000589827 1791 ntTSL 210.99□□□□□ -0.651e-6■■■□□ 15.1
SRSF1Q07955 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC10.43□□□□□ -0.741e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.131e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-208ENST00000564414 528 ntTSL 1 (best)5.4□□□□□ -1.541e-6■■■□□ 15.1
SRSF1Q07955 SEC14L1-210ENST00000568056 424 ntTSL 1 (best)4.07□□□□□ -1.761e-6■■■□□ 15.1
SRSF1Q07955 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-8■■■□□ 15.1
SRSF1Q07955 FDFT1-206ENST00000525571 810 ntTSL 318.42■□□□□ 0.542e-7■■■□□ 15.1
SRSF1Q07955 FDFT1-211ENST00000527045 642 ntTSL 1 (best)9.6□□□□□ -0.872e-7■■■□□ 15.1
SRSF1Q07955 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.38□□□□□ -1.712e-6■■■□□ 15.1
SRSF1Q07955 FUS-211ENST00000568901 521 ntTSL 211.08□□□□□ -0.643e-8■■■□□ 15.1
SRSF1Q07955 LDLR-212ENST00000560467 928 ntTSL 311.5□□□□□ -0.572e-6■■■□□ 15.1
SRSF1Q07955 SLC2A4RG-206ENST00000491109 637 ntTSL 214.55□□□□□ -0.082e-7■■■□□ 15
SRSF1Q07955 DNM1-205ENST00000463998 871 ntTSL 414.74□□□□□ -0.053e-7■■■□□ 15
SRSF1Q07955 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.143e-7■■■□□ 15
SRSF1Q07955 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.86□□□□□ -0.193e-7■■■□□ 15
SRSF1Q07955 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.293e-7■■■□□ 15
SRSF1Q07955 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.06□□□□□ -0.323e-7■■■□□ 15
SRSF1Q07955 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.473e-7■■■□□ 15
SRSF1Q07955 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.483e-7■■■□□ 15
SRSF1Q07955 DNM1-204ENST00000441149 3286 ntTSL 1 (best)12.03□□□□□ -0.483e-7■■■□□ 15
SRSF1Q07955 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.543e-7■■■□□ 15
SRSF1Q07955 DNM1-227ENST00000637999 1429 ntTSL 511.31□□□□□ -0.63e-7■■■□□ 15
SRSF1Q07955 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.623e-7■■■□□ 15
SRSF1Q07955 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.823e-7■■■□□ 15
SRSF1Q07955 DNM1-207ENST00000482638 672 ntTSL 58.75□□□□□ -1.013e-7■■■□□ 15
SRSF1Q07955 PDXDC1-213ENST00000566426 283 ntTSL 520.53■□□□□ 0.885e-9■■■□□ 15
SRSF1Q07955 GOLGA4-205ENST00000431105 568 ntTSL 313.18□□□□□ -0.33e-8■■■□□ 15
SRSF1Q07955 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC7.68□□□□□ -1.181e-6■■■□□ 15
SRSF1Q07955 CCAR1-203ENST00000479143 478 ntTSL 54.48□□□□□ -1.691e-9■■■□□ 15
SRSF1Q07955 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.92e-7■■■□□ 15
SRSF1Q07955 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.832e-7■■■□□ 15
SRSF1Q07955 HNRNPM-205ENST00000596295 910 ntTSL 316.67■□□□□ 0.264e-8■■■□□ 15
SRSF1Q07955 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.33e-8■■■□□ 15
SRSF1Q07955 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.143e-8■■■□□ 15
SRSF1Q07955 RXRB-204ENST00000483281 1977 ntTSL 518.06■□□□□ 0.485e-13■■■□□ 15
SRSF1Q07955 RXRB-203ENST00000481441 1330 ntTSL 217.8■□□□□ 0.445e-13■■■□□ 15
SRSF1Q07955 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.155e-13■■■□□ 15
SRSF1Q07955 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.365e-13■■■□□ 15
SRSF1Q07955 ELP2-227ENST00000545302 635 ntTSL 213.59□□□□□ -0.235e-6■■■□□ 15
SRSF1Q07955 ELP2-209ENST00000536830 636 ntTSL 213.56□□□□□ -0.245e-6■■■□□ 15
SRSF1Q07955 ELP2-214ENST00000540766 1049 ntTSL 313.52□□□□□ -0.255e-6■■■□□ 15
SRSF1Q07955 ELP2-218ENST00000541748 674 ntTSL 213.42□□□□□ -0.265e-6■■■□□ 15
SRSF1Q07955 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.473e-6■■■□□ 15
SRSF1Q07955 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.137e-7■■■□□ 15
SRSF1Q07955 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.167e-7■■■□□ 15
SRSF1Q07955 PHRF1-206ENST00000534320 5178 ntTSL 514.03□□□□□ -0.167e-7■■■□□ 15
SRSF1Q07955 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.257e-7■■■□□ 15
SRSF1Q07955 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.387e-7■■■□□ 15
SRSF1Q07955 CDK5RAP3-219ENST00000580670 1768 ntTSL 511.77□□□□□ -0.522e-7■■■□□ 15
SRSF1Q07955 CDK5RAP3-232ENST00000584168 2684 ntTSL 59.9□□□□□ -0.822e-7■■■□□ 15
SRSF1Q07955 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.76■■□□□ 1.071e-8■■■□□ 15
SRSF1Q07955 MINOS1-208ENST00000498067 481 ntTSL 220.26■□□□□ 0.832e-10■■■□□ 15
SRSF1Q07955 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.571e-8■■■□□ 15
Retrieved 100 of 14,836 protein–RNA pairs in 95.3 ms