Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SPCS3P61009 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.54■□□□□ 0.24
SPCS3P61009 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.54■□□□□ 0.24
SPCS3P61009 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.54■□□□□ 0.24
SPCS3P61009 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.54■□□□□ 0.24
SPCS3P61009 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.54■□□□□ 0.24
SPCS3P61009 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.54■□□□□ 0.24
SPCS3P61009 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SPCS3P61009 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.54■□□□□ 0.24
SPCS3P61009 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SPCS3P61009 AL512408.1-201ENST00000569378 2000 ntBASIC16.53■□□□□ 0.24
SPCS3P61009 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SPCS3P61009 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SPCS3P61009 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 AC099791.1-201ENST00000416440 715 ntBASIC16.53■□□□□ 0.24
SPCS3P61009 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.53■□□□□ 0.24
SPCS3P61009 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.53■□□□□ 0.24
SPCS3P61009 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 AC027682.1-201ENST00000562846 899 ntBASIC16.53■□□□□ 0.24
SPCS3P61009 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.53■□□□□ 0.24
SPCS3P61009 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.53■□□□□ 0.24
SPCS3P61009 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPCS3P61009 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.53■□□□□ 0.24
SPCS3P61009 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.52■□□□□ 0.24
SPCS3P61009 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SPCS3P61009 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.52■□□□□ 0.24
SPCS3P61009 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPCS3P61009 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.52■□□□□ 0.23
SPCS3P61009 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPCS3P61009 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SPCS3P61009 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SPCS3P61009 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.51■□□□□ 0.23
SPCS3P61009 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SPCS3P61009 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SPCS3P61009 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SPCS3P61009 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms