Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CLCN1P35523 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CLCN1P35523 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CLCN1P35523 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN1P35523 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CLCN1P35523 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN1P35523 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.15■■□□□ 1.3
CLCN1P35523 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.15■■□□□ 1.3
CLCN1P35523 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.15■■□□□ 1.3
CLCN1P35523 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN1P35523 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.15■■□□□ 1.3
CLCN1P35523 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CLCN1P35523 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN1P35523 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CLCN1P35523 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCN1P35523 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
CLCN1P35523 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
CLCN1P35523 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.14■■□□□ 1.3
CLCN1P35523 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.14■■□□□ 1.3
CLCN1P35523 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCN1P35523 AC096631.2-201ENST00000436136 790 ntBASIC23.14■■□□□ 1.29
CLCN1P35523 AP005435.1-201ENST00000529293 1178 ntBASIC23.14■■□□□ 1.29
CLCN1P35523 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.14■■□□□ 1.29
CLCN1P35523 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.14■■□□□ 1.29
CLCN1P35523 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CLCN1P35523 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.14■■□□□ 1.29
CLCN1P35523 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
CLCN1P35523 AC135279.3-201ENST00000610945 1311 ntBASIC23.13■■□□□ 1.29
CLCN1P35523 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 AC125437.2-201ENST00000625180 2167 ntBASIC23.13■■□□□ 1.29
CLCN1P35523 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CLCN1P35523 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.13■■□□□ 1.29
CLCN1P35523 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.13■■□□□ 1.29
CLCN1P35523 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CLCN1P35523 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CLCN1P35523 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.13■■□□□ 1.29
CLCN1P35523 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLCN1P35523 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLCN1P35523 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CLCN1P35523 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CLCN1P35523 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.12■■□□□ 1.29
CLCN1P35523 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.12■■□□□ 1.29
CLCN1P35523 AC087239.1-201ENST00000622671 572 ntBASIC23.12■■□□□ 1.29
CLCN1P35523 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.12■■□□□ 1.29
CLCN1P35523 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.12■■□□□ 1.29
CLCN1P35523 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.12■■□□□ 1.29
CLCN1P35523 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CLCN1P35523 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 BX842568.3-201ENST00000418104 571 ntBASIC23.11■■□□□ 1.29
CLCN1P35523 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.11■■□□□ 1.29
CLCN1P35523 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CLCN1P35523 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC23.11■■□□□ 1.29
CLCN1P35523 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CLCN1P35523 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 AC005332.7-201ENST00000614046 2005 ntBASIC23.11■■□□□ 1.29
CLCN1P35523 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.11■■□□□ 1.29
CLCN1P35523 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCN1P35523 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CLCN1P35523 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.1■■□□□ 1.29
CLCN1P35523 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CLCN1P35523 OR7E47P-201ENST00000546390 1422 ntBASIC23.1■■□□□ 1.29
CLCN1P35523 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
CLCN1P35523 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.1■■□□□ 1.29
CLCN1P35523 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.1■■□□□ 1.29
CLCN1P35523 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
CLCN1P35523 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCN1P35523 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.1■■□□□ 1.29
CLCN1P35523 AL032819.2-201ENST00000624543 2162 ntBASIC23.1■■□□□ 1.29
CLCN1P35523 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms