Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 AL512631.2-201ENST00000604634 923 ntBASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV3S1A0A5B6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 AC005224.4-201ENST00000583262 1652 ntBASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV3S1A0A5B6 AC061975.6-201ENST00000579045 1553 ntBASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 MIR2861-201ENST00000636310 90 ntBASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 AL691432.2-201ENST00000607222 2038 ntBASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV3S1A0A5B6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV3S1A0A5B6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV3S1A0A5B6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms