Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV34A0A0B4J273 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 UNC93B8-201ENST00000511903 705 ntBASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV34A0A0B4J273 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV34A0A0B4J273 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV34A0A0B4J273 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV34A0A0B4J273 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms