Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PTCH2Q9Y6C5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PTCH2Q9Y6C5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PTCH2Q9Y6C5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.5■■■□□ 2.47
PTCH2Q9Y6C5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.5■■■□□ 2.47
PTCH2Q9Y6C5 GPX1-201ENST00000419349 1106 ntBASIC30.49■■■□□ 2.47
PTCH2Q9Y6C5 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.48■■■□□ 2.47
PTCH2Q9Y6C5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PTCH2Q9Y6C5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
PTCH2Q9Y6C5 RNF126P1-201ENST00000567452 1320 ntBASIC30.44■■■□□ 2.46
PTCH2Q9Y6C5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PTCH2Q9Y6C5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PTCH2Q9Y6C5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PTCH2Q9Y6C5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
PTCH2Q9Y6C5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
PTCH2Q9Y6C5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.34■■■□□ 2.45
PTCH2Q9Y6C5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTCH2Q9Y6C5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.32■■■□□ 2.44
PTCH2Q9Y6C5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.32■■■□□ 2.44
PTCH2Q9Y6C5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PTCH2Q9Y6C5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 AC012354.3-201ENST00000623734 483 ntBASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 NTF6A-201ENST00000591175 560 ntBASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
PTCH2Q9Y6C5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.25■■■□□ 2.43
PTCH2Q9Y6C5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.24■■■□□ 2.43
PTCH2Q9Y6C5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.23■■■□□ 2.43
PTCH2Q9Y6C5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PTCH2Q9Y6C5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
PTCH2Q9Y6C5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.21■■■□□ 2.43
PTCH2Q9Y6C5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PTCH2Q9Y6C5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PTCH2Q9Y6C5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
PTCH2Q9Y6C5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PTCH2Q9Y6C5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
PTCH2Q9Y6C5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PTCH2Q9Y6C5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
PTCH2Q9Y6C5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
PTCH2Q9Y6C5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PTCH2Q9Y6C5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
PTCH2Q9Y6C5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
PTCH2Q9Y6C5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PTCH2Q9Y6C5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PTCH2Q9Y6C5 AC022413.1-201ENST00000624602 984 ntBASIC30.11■■■□□ 2.41
PTCH2Q9Y6C5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 AC008813.1-201ENST00000536597 885 ntBASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 AL033527.3-201ENST00000566366 1196 ntBASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 AC018358.1-201ENST00000631079 1402 ntBASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms