Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ATP13A1Q9HD20 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ATP13A1Q9HD20 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ATP13A1Q9HD20 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ATP13A1Q9HD20 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
ATP13A1Q9HD20 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ATP13A1Q9HD20 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.98■■□□□ 1.91
ATP13A1Q9HD20 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
ATP13A1Q9HD20 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.98■■□□□ 1.91
ATP13A1Q9HD20 AC108673.1-201ENST00000510422 1159 ntBASIC26.98■■□□□ 1.91
ATP13A1Q9HD20 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
ATP13A1Q9HD20 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ATP13A1Q9HD20 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.97■■□□□ 1.91
ATP13A1Q9HD20 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.97■■□□□ 1.91
ATP13A1Q9HD20 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP13A1Q9HD20 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ATP13A1Q9HD20 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ATP13A1Q9HD20 AC010864.1-201ENST00000609407 1511 ntBASIC26.95■■□□□ 1.91
ATP13A1Q9HD20 AL135925.1-201ENST00000605920 1701 ntBASIC26.95■■□□□ 1.9
ATP13A1Q9HD20 MIR6090-201ENST00000622481 60 ntBASIC26.94■■□□□ 1.9
ATP13A1Q9HD20 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ATP13A1Q9HD20 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
ATP13A1Q9HD20 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.93■■□□□ 1.9
ATP13A1Q9HD20 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATP13A1Q9HD20 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATP13A1Q9HD20 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.92■■□□□ 1.9
ATP13A1Q9HD20 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.91■■□□□ 1.9
ATP13A1Q9HD20 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.91■■□□□ 1.9
ATP13A1Q9HD20 ABCB10P1-201ENST00000614297 2181 ntBASIC26.91■■□□□ 1.9
ATP13A1Q9HD20 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATP13A1Q9HD20 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
ATP13A1Q9HD20 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
ATP13A1Q9HD20 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.9■■□□□ 1.9
ATP13A1Q9HD20 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
ATP13A1Q9HD20 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.89■■□□□ 1.9
ATP13A1Q9HD20 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.89■■□□□ 1.89
ATP13A1Q9HD20 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ATP13A1Q9HD20 ST7-AS1-201ENST00000456775 1889 ntBASIC26.87■■□□□ 1.89
ATP13A1Q9HD20 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ATP13A1Q9HD20 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ATP13A1Q9HD20 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATP13A1Q9HD20 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
ATP13A1Q9HD20 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP13A1Q9HD20 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP13A1Q9HD20 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP13A1Q9HD20 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATP13A1Q9HD20 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ATP13A1Q9HD20 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.81■■□□□ 1.88
ATP13A1Q9HD20 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
ATP13A1Q9HD20 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ATP13A1Q9HD20 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.8■■□□□ 1.88
ATP13A1Q9HD20 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP13A1Q9HD20 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP13A1Q9HD20 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP13A1Q9HD20 DUX4L29-201ENST00000425409 679 ntBASIC26.79■■□□□ 1.88
ATP13A1Q9HD20 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP13A1Q9HD20 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP13A1Q9HD20 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP13A1Q9HD20 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ATP13A1Q9HD20 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP13A1Q9HD20 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.76■■□□□ 1.87
ATP13A1Q9HD20 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP13A1Q9HD20 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP13A1Q9HD20 AC021231.2-201ENST00000594613 730 ntBASIC26.75■■□□□ 1.87
ATP13A1Q9HD20 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP13A1Q9HD20 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP13A1Q9HD20 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP13A1Q9HD20 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.73■■□□□ 1.87
ATP13A1Q9HD20 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP13A1Q9HD20 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP13A1Q9HD20 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP13A1Q9HD20 ABHD17AP4-201ENST00000411545 909 ntBASIC26.72■■□□□ 1.87
ATP13A1Q9HD20 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP13A1Q9HD20 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP13A1Q9HD20 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ATP13A1Q9HD20 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.7■■□□□ 1.86
ATP13A1Q9HD20 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP13A1Q9HD20 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP13A1Q9HD20 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP13A1Q9HD20 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP13A1Q9HD20 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP13A1Q9HD20 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP13A1Q9HD20 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ATP13A1Q9HD20 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP13A1Q9HD20 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP13A1Q9HD20 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
ATP13A1Q9HD20 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms