Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.77■■■□□ 2.68
ZNF408Q9H9D4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ZNF408Q9H9D4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.75■■■□□ 2.67
ZNF408Q9H9D4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ZNF408Q9H9D4 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.73■■■□□ 2.67
ZNF408Q9H9D4 GPX1-201ENST00000419349 1106 ntBASIC31.72■■■□□ 2.67
ZNF408Q9H9D4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZNF408Q9H9D4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZNF408Q9H9D4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ZNF408Q9H9D4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ZNF408Q9H9D4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.7■■■□□ 2.67
ZNF408Q9H9D4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ZNF408Q9H9D4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ZNF408Q9H9D4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.68■■■□□ 2.66
ZNF408Q9H9D4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.67■■■□□ 2.66
ZNF408Q9H9D4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF408Q9H9D4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF408Q9H9D4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF408Q9H9D4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ZNF408Q9H9D4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZNF408Q9H9D4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.64■■■□□ 2.66
ZNF408Q9H9D4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.64■■■□□ 2.66
ZNF408Q9H9D4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZNF408Q9H9D4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.65
ZNF408Q9H9D4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.65
ZNF408Q9H9D4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
ZNF408Q9H9D4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ZNF408Q9H9D4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF408Q9H9D4 RNF126P1-201ENST00000567452 1320 ntBASIC31.61■■■□□ 2.65
ZNF408Q9H9D4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZNF408Q9H9D4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.6■■■□□ 2.65
ZNF408Q9H9D4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
ZNF408Q9H9D4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ZNF408Q9H9D4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.59■■■□□ 2.65
ZNF408Q9H9D4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.59■■■□□ 2.65
ZNF408Q9H9D4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
ZNF408Q9H9D4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.57■■■□□ 2.64
ZNF408Q9H9D4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
ZNF408Q9H9D4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
ZNF408Q9H9D4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.55■■■□□ 2.64
ZNF408Q9H9D4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
ZNF408Q9H9D4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZNF408Q9H9D4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZNF408Q9H9D4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.54■■■□□ 2.64
ZNF408Q9H9D4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF408Q9H9D4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF408Q9H9D4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.51■■■□□ 2.63
ZNF408Q9H9D4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZNF408Q9H9D4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
ZNF408Q9H9D4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.5■■■□□ 2.63
ZNF408Q9H9D4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
ZNF408Q9H9D4 AC012354.3-201ENST00000623734 483 ntBASIC31.49■■■□□ 2.63
ZNF408Q9H9D4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZNF408Q9H9D4 NTF6A-201ENST00000591175 560 ntBASIC31.46■■■□□ 2.63
ZNF408Q9H9D4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
ZNF408Q9H9D4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.44■■■□□ 2.62
ZNF408Q9H9D4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ZNF408Q9H9D4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
ZNF408Q9H9D4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
ZNF408Q9H9D4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.43■■■□□ 2.62
ZNF408Q9H9D4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ZNF408Q9H9D4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ZNF408Q9H9D4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZNF408Q9H9D4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.41■■■□□ 2.62
ZNF408Q9H9D4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.41■■■□□ 2.62
ZNF408Q9H9D4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.4■■■□□ 2.62
ZNF408Q9H9D4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ZNF408Q9H9D4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ZNF408Q9H9D4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF408Q9H9D4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
ZNF408Q9H9D4 AC022413.1-201ENST00000624602 984 ntBASIC31.36■■■□□ 2.61
ZNF408Q9H9D4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.36■■■□□ 2.61
ZNF408Q9H9D4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZNF408Q9H9D4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
ZNF408Q9H9D4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
ZNF408Q9H9D4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
ZNF408Q9H9D4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ZNF408Q9H9D4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZNF408Q9H9D4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ZNF408Q9H9D4 AL033527.3-201ENST00000566366 1196 ntBASIC31.32■■■□□ 2.6
ZNF408Q9H9D4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZNF408Q9H9D4 AC008813.1-201ENST00000536597 885 ntBASIC31.31■■■□□ 2.6
ZNF408Q9H9D4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.31■■■□□ 2.6
ZNF408Q9H9D4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZNF408Q9H9D4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZNF408Q9H9D4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
ZNF408Q9H9D4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.3■■■□□ 2.6
ZNF408Q9H9D4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZNF408Q9H9D4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.29■■■□□ 2.6
ZNF408Q9H9D4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.29■■■□□ 2.6
ZNF408Q9H9D4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZNF408Q9H9D4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZNF408Q9H9D4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZNF408Q9H9D4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms