Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 WASH5P-204ENST00000632292 975 ntBASIC27.35■■□□□ 1.97
DDX47Q9H0S4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
DDX47Q9H0S4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.35■■□□□ 1.97
DDX47Q9H0S4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX47Q9H0S4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX47Q9H0S4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX47Q9H0S4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX47Q9H0S4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX47Q9H0S4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX47Q9H0S4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
DDX47Q9H0S4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
DDX47Q9H0S4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX47Q9H0S4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.29■■□□□ 1.96
DDX47Q9H0S4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.29■■□□□ 1.96
DDX47Q9H0S4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.29■■□□□ 1.96
DDX47Q9H0S4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX47Q9H0S4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
DDX47Q9H0S4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
DDX47Q9H0S4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX47Q9H0S4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX47Q9H0S4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
DDX47Q9H0S4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX47Q9H0S4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX47Q9H0S4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
DDX47Q9H0S4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
DDX47Q9H0S4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.24■■□□□ 1.95
DDX47Q9H0S4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX47Q9H0S4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
DDX47Q9H0S4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DDX47Q9H0S4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.22■■□□□ 1.95
DDX47Q9H0S4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
DDX47Q9H0S4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX47Q9H0S4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX47Q9H0S4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX47Q9H0S4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
DDX47Q9H0S4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX47Q9H0S4 AL133380.1-201ENST00000506013 324 ntBASIC27.18■■□□□ 1.94
DDX47Q9H0S4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
DDX47Q9H0S4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.18■■□□□ 1.94
DDX47Q9H0S4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX47Q9H0S4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX47Q9H0S4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
DDX47Q9H0S4 AC010864.1-201ENST00000609407 1511 ntBASIC27.16■■□□□ 1.94
DDX47Q9H0S4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.16■■□□□ 1.94
DDX47Q9H0S4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
DDX47Q9H0S4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
DDX47Q9H0S4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
DDX47Q9H0S4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX47Q9H0S4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX47Q9H0S4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.15■■□□□ 1.94
DDX47Q9H0S4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DDX47Q9H0S4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.14■■□□□ 1.94
DDX47Q9H0S4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.14■■□□□ 1.94
DDX47Q9H0S4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
DDX47Q9H0S4 AL121749.1-202ENST00000609313 2153 ntBASIC27.13■■□□□ 1.93
DDX47Q9H0S4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.13■■□□□ 1.93
DDX47Q9H0S4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
DDX47Q9H0S4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX47Q9H0S4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX47Q9H0S4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX47Q9H0S4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
DDX47Q9H0S4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX47Q9H0S4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.05■■□□□ 1.92
DDX47Q9H0S4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX47Q9H0S4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.05■■□□□ 1.92
DDX47Q9H0S4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX47Q9H0S4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
DDX47Q9H0S4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX47Q9H0S4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.03■■□□□ 1.92
DDX47Q9H0S4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
DDX47Q9H0S4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX47Q9H0S4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX47Q9H0S4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX47Q9H0S4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX47Q9H0S4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
DDX47Q9H0S4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
DDX47Q9H0S4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX47Q9H0S4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
DDX47Q9H0S4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX47Q9H0S4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX47Q9H0S4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.99■■□□□ 1.91
DDX47Q9H0S4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
DDX47Q9H0S4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.98■■□□□ 1.91
DDX47Q9H0S4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.98■■□□□ 1.91
DDX47Q9H0S4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms