Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.55■■■□□ 2
RNF38Q9H0F5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.55■■■□□ 2
RNF38Q9H0F5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.53■■■□□ 2
RNF38Q9H0F5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.53■■■□□ 2
RNF38Q9H0F5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RNF38Q9H0F5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
RNF38Q9H0F5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RNF38Q9H0F5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.5■■□□□ 1.99
RNF38Q9H0F5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
RNF38Q9H0F5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.48■■□□□ 1.99
RNF38Q9H0F5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RNF38Q9H0F5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RNF38Q9H0F5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.46■■□□□ 1.99
RNF38Q9H0F5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
RNF38Q9H0F5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
RNF38Q9H0F5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
RNF38Q9H0F5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.45■■□□□ 1.98
RNF38Q9H0F5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RNF38Q9H0F5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.44■■□□□ 1.98
RNF38Q9H0F5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.44■■□□□ 1.98
RNF38Q9H0F5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
RNF38Q9H0F5 HLA-V-202ENST00000446817 847 ntBASIC27.43■■□□□ 1.98
RNF38Q9H0F5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF38Q9H0F5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
RNF38Q9H0F5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
RNF38Q9H0F5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.41■■□□□ 1.98
RNF38Q9H0F5 AC010864.1-201ENST00000609407 1511 ntBASIC27.4■■□□□ 1.98
RNF38Q9H0F5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RNF38Q9H0F5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RNF38Q9H0F5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.39■■□□□ 1.98
RNF38Q9H0F5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RNF38Q9H0F5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.38■■□□□ 1.97
RNF38Q9H0F5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RNF38Q9H0F5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RNF38Q9H0F5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RNF38Q9H0F5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF38Q9H0F5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.35■■□□□ 1.97
RNF38Q9H0F5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RNF38Q9H0F5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF38Q9H0F5 LINC01971-201ENST00000617888 1048 ntBASIC27.34■■□□□ 1.97
RNF38Q9H0F5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.33■■□□□ 1.97
RNF38Q9H0F5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
RNF38Q9H0F5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.33■■□□□ 1.97
RNF38Q9H0F5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.33■■□□□ 1.97
RNF38Q9H0F5 DUX4L11-201ENST00000611504 1267 ntBASIC27.33■■□□□ 1.97
RNF38Q9H0F5 DUX4L12-201ENST00000614593 1267 ntBASIC27.33■■□□□ 1.97
RNF38Q9H0F5 DUX4L14-201ENST00000621227 1267 ntBASIC27.33■■□□□ 1.97
RNF38Q9H0F5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RNF38Q9H0F5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF38Q9H0F5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.3■■□□□ 1.96
RNF38Q9H0F5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.29■■□□□ 1.96
RNF38Q9H0F5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RNF38Q9H0F5 MIR3648-2-201ENST00000581792 180 ntBASIC27.29■■□□□ 1.96
RNF38Q9H0F5 MIR3648-1-201ENST00000615959 180 ntBASIC27.29■■□□□ 1.96
RNF38Q9H0F5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF38Q9H0F5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF38Q9H0F5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.28■■□□□ 1.96
RNF38Q9H0F5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF38Q9H0F5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.27■■□□□ 1.96
RNF38Q9H0F5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
RNF38Q9H0F5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.26■■□□□ 1.95
RNF38Q9H0F5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF38Q9H0F5 AL135925.1-201ENST00000605920 1701 ntBASIC27.25■■□□□ 1.95
RNF38Q9H0F5 AC016575.1-201ENST00000607026 382 ntBASIC27.25■■□□□ 1.95
RNF38Q9H0F5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.25■■□□□ 1.95
RNF38Q9H0F5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF38Q9H0F5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
RNF38Q9H0F5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.23■■□□□ 1.95
RNF38Q9H0F5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.23■■□□□ 1.95
RNF38Q9H0F5 CR559946.2-201ENST00000623684 991 ntBASIC27.23■■□□□ 1.95
RNF38Q9H0F5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.22■■□□□ 1.95
RNF38Q9H0F5 MIR639-201ENST00000384974 98 ntBASIC27.21■■□□□ 1.95
RNF38Q9H0F5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RNF38Q9H0F5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF38Q9H0F5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.2■■□□□ 1.94
RNF38Q9H0F5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF38Q9H0F5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
RNF38Q9H0F5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.18■■□□□ 1.94
RNF38Q9H0F5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RNF38Q9H0F5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF38Q9H0F5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF38Q9H0F5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF38Q9H0F5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RNF38Q9H0F5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF38Q9H0F5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RNF38Q9H0F5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.16■■□□□ 1.94
RNF38Q9H0F5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF38Q9H0F5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.15■■□□□ 1.94
RNF38Q9H0F5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms