Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.94■■□□□ 1.16e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-204ENST00000562357 792 ntTSL 421.19■□□□□ 0.986e-8■■■■■ 50.5
XRN2Q9H0D6 ARVCF-209ENST00000487793 863 ntTSL 221.16■□□□□ 0.986e-9■■■■■ 50.5
XRN2Q9H0D6 FAM3C-202ENST00000412653 561 ntTSL 420.74■□□□□ 0.916e-9■■■■■ 50.5
XRN2Q9H0D6 ADCK5-205ENST00000529654 2027 ntTSL 1 (best)20.48■□□□□ 0.876e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.856e-8■■■■■ 50.5
XRN2Q9H0D6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.836e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.826e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-207ENST00000473551 2108 ntTSL 220.05■□□□□ 0.86e-9■■■■■ 50.5
XRN2Q9H0D6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.776e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.746e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.656e-8■■■■■ 50.5
XRN2Q9H0D6 MUS81-209ENST00000529786 759 ntTSL 319.07■□□□□ 0.646e-9■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-218ENST00000523378 949 ntTSL 319.03■□□□□ 0.646e-9■■■■■ 50.5
XRN2Q9H0D6 COPS9-202ENST00000403160 609 ntTSL 218.77■□□□□ 0.66e-9■■■■■ 50.5
XRN2Q9H0D6 HPRT1-202ENST00000462974 724 ntTSL 318.62■□□□□ 0.576e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.53■□□□□ 0.566e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-204ENST00000507345 726 ntTSL 518.29■□□□□ 0.526e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.56e-8■■■■■ 50.5
XRN2Q9H0D6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.56e-9■■■■■ 50.5
XRN2Q9H0D6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.456e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.346e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.17■□□□□ 0.346e-8■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-208ENST00000519136 816 ntTSL 517.13■□□□□ 0.336e-9■■■■■ 50.5
XRN2Q9H0D6 MUS81-212ENST00000530282 755 ntTSL 217.08■□□□□ 0.326e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-213ENST00000566756 1950 ntTSL 217.07■□□□□ 0.326e-8■■■■■ 50.5
XRN2Q9H0D6 ARVCF-210ENST00000492625 631 ntTSL 316.68■□□□□ 0.266e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.186e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.156e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.68■□□□□ 0.16e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.13■□□□□ 0.016e-9■■■■■ 50.5
XRN2Q9H0D6 CLASRP-207ENST00000587112 867 ntTSL 1 (best)14.89□□□□□ -0.036e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.116e-9■■■■■ 50.5
XRN2Q9H0D6 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.256e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-203ENST00000472125 913 ntTSL 313.11□□□□□ -0.316e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-208ENST00000585057 1113 ntTSL 312.44□□□□□ -0.426e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC12.05□□□□□ -0.486e-8■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.96□□□□□ -0.496e-9■■■■■ 50.5
XRN2Q9H0D6 RERE-214ENST00000488215 962 ntTSL 311.66□□□□□ -0.546e-9■■■■■ 50.5
XRN2Q9H0D6 STMN3-205ENST00000634126 605 ntTSL 311.26□□□□□ -0.618e-8■■■■■ 50.5
XRN2Q9H0D6 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC11.19□□□□□ -0.626e-9■■■■■ 50.5
XRN2Q9H0D6 RPS2-214ENST00000533186 625 ntTSL 311.03□□□□□ -0.646e-9■■■■■ 50.5
XRN2Q9H0D6 RPS2-212ENST00000532746 931 ntTSL 310.78□□□□□ -0.686e-9■■■■■ 50.5
XRN2Q9H0D6 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.716e-9■■■■■ 50.5
XRN2Q9H0D6 RERE-207ENST00000464972 743 ntTSL 510.45□□□□□ -0.746e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-206ENST00000537392 2038 ntTSL 210.15□□□□□ -0.786e-9■■■■■ 50.5
XRN2Q9H0D6 AC244636.2-201ENST00000448031 1669 ntBASIC10.14□□□□□ -0.796e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.846e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-203ENST00000379073 3671 ntTSL 27.47□□□□□ -1.216e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.276e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.286e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.85□□□□□ -1.316e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.446e-9■■■■■ 50.5
XRN2Q9H0D6 RNU6-707P-201ENST00000364647 95 ntBASIC4.74□□□□□ -1.656e-9■■■■■ 50.5
XRN2Q9H0D6 RNU2-36P-201ENST00000410361 191 ntBASIC3.6□□□□□ -1.836e-9■■■■■ 50.5
XRN2Q9H0D6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.871e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-206ENST00000478214 716 ntTSL 1 (best)18.29■□□□□ 0.521e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.491e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.481e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-11■■■■■ 50.4
XRN2Q9H0D6 FAM95C-204ENST00000637322 930 ntAPPRIS ALT2 TSL 519.31■□□□□ 0.685e-7■■■■■ 50.3
XRN2Q9H0D6 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC14.98□□□□□ -0.015e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-203ENST00000637288 1965 ntAPPRIS ALT2 TSL 514.29□□□□□ -0.125e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.385e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-202ENST00000636756 654 ntTSL 28.11□□□□□ -1.115e-7■■■■■ 50.3
XRN2Q9H0D6 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 328.4■■■□□ 2.143e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.872e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-203ENST00000449710 1070 ntTSL 520.18■□□□□ 0.822e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-204ENST00000615226 877 ntTSL 36.66□□□□□ -1.342e-7■■■■■ 50.1
XRN2Q9H0D6 AGO2-203ENST00000518019 421 ntTSL 216.12■□□□□ 0.178e-11■■■■■ 50.1
XRN2Q9H0D6 RICTOR-206ENST00000510711 3126 ntTSL 29.46□□□□□ -0.892e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-209ENST00000514735 686 ntTSL 37.63□□□□□ -1.192e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)6.75□□□□□ -1.332e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.37□□□□□ -1.872e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)3.1□□□□□ -1.912e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.022e-12■■■■■ 49.7
XRN2Q9H0D6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.195e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.075e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.035e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.665e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.755e-9■■■■■ 49.6
XRN2Q9H0D6 PRKAR1B-208ENST00000456696 518 ntTSL 519.41■□□□□ 0.76e-7■■■■■ 49.1
XRN2Q9H0D6 UBE2Z-204ENST00000506498 766 ntTSL 414.08□□□□□ -0.166e-9■■■■■ 49
XRN2Q9H0D6 RUFY1-207ENST00000502984 658 ntTSL 322.72■■□□□ 1.232e-7■■■■■ 48.7
XRN2Q9H0D6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.92e-7■■■■■ 48.7
XRN2Q9H0D6 RUFY1-203ENST00000393448 2320 ntTSL 1 (best)18.35■□□□□ 0.532e-7■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-213ENST00000611549 4294 ntTSL 513.61□□□□□ -0.234e-8■■■■■ 48.7
XRN2Q9H0D6 C22orf24-202ENST00000486651 823 ntTSL 1 (best)13.27□□□□□ -0.291e-323■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC12.33□□□□□ -0.444e-8■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.554e-8■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.824e-8■■■■■ 48.7
XRN2Q9H0D6 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC9.95□□□□□ -0.821e-323■■■■■ 48.7
XRN2Q9H0D6 PCK1-205ENST00000485958 581 ntTSL 27.56□□□□□ -1.24e-6■■■■■ 48.7
XRN2Q9H0D6 ANKRD28-202ENST00000412318 4408 ntTSL 24.61□□□□□ -1.674e-11■■■■■ 48.7
XRN2Q9H0D6 CAPZA2-202ENST00000414148 360 ntTSL 520.19■□□□□ 0.824e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-211ENST00000484325 324 ntTSL 1 (best)11.53□□□□□ -0.564e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.714e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-206ENST00000461878 621 ntTSL 1 (best)8.66□□□□□ -1.024e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.34□□□□□ -1.554e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.38□□□□□ -1.714e-15■■■■■ 48.6
Retrieved 100 of 21,068 protein–RNA pairs in 392.7 ms