Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.94■■□□□ 1.16e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-204ENST00000562357 792 ntTSL 421.19■□□□□ 0.986e-8■■■■■ 50.5
XRN2Q9H0D6 ARVCF-209ENST00000487793 863 ntTSL 221.16■□□□□ 0.986e-9■■■■■ 50.5
XRN2Q9H0D6 FAM3C-202ENST00000412653 561 ntTSL 420.74■□□□□ 0.916e-9■■■■■ 50.5
XRN2Q9H0D6 ADCK5-205ENST00000529654 2027 ntTSL 1 (best)20.48■□□□□ 0.876e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.856e-8■■■■■ 50.5
XRN2Q9H0D6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.836e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.826e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-207ENST00000473551 2108 ntTSL 220.05■□□□□ 0.86e-9■■■■■ 50.5
XRN2Q9H0D6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.776e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.746e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.656e-8■■■■■ 50.5
XRN2Q9H0D6 MUS81-209ENST00000529786 759 ntTSL 319.07■□□□□ 0.646e-9■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-218ENST00000523378 949 ntTSL 319.03■□□□□ 0.646e-9■■■■■ 50.5
XRN2Q9H0D6 COPS9-202ENST00000403160 609 ntTSL 218.77■□□□□ 0.66e-9■■■■■ 50.5
XRN2Q9H0D6 HPRT1-202ENST00000462974 724 ntTSL 318.62■□□□□ 0.576e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.53■□□□□ 0.566e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-204ENST00000507345 726 ntTSL 518.29■□□□□ 0.526e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.56e-8■■■■■ 50.5
XRN2Q9H0D6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.56e-9■■■■■ 50.5
XRN2Q9H0D6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.456e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.346e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.17■□□□□ 0.346e-8■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-208ENST00000519136 816 ntTSL 517.13■□□□□ 0.336e-9■■■■■ 50.5
XRN2Q9H0D6 MUS81-212ENST00000530282 755 ntTSL 217.08■□□□□ 0.326e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-213ENST00000566756 1950 ntTSL 217.07■□□□□ 0.326e-8■■■■■ 50.5
XRN2Q9H0D6 ARVCF-210ENST00000492625 631 ntTSL 316.68■□□□□ 0.266e-9■■■■■ 50.5
XRN2Q9H0D6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.186e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.156e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.68■□□□□ 0.16e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.13■□□□□ 0.016e-9■■■■■ 50.5
XRN2Q9H0D6 CLASRP-207ENST00000587112 867 ntTSL 1 (best)14.89□□□□□ -0.036e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.116e-9■■■■■ 50.5
XRN2Q9H0D6 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.256e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-203ENST00000472125 913 ntTSL 313.11□□□□□ -0.316e-9■■■■■ 50.5
XRN2Q9H0D6 RUVBL1-208ENST00000585057 1113 ntTSL 312.44□□□□□ -0.426e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC12.05□□□□□ -0.486e-8■■■■■ 50.5
XRN2Q9H0D6 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.96□□□□□ -0.496e-9■■■■■ 50.5
XRN2Q9H0D6 RERE-214ENST00000488215 962 ntTSL 311.66□□□□□ -0.546e-9■■■■■ 50.5
XRN2Q9H0D6 STMN3-205ENST00000634126 605 ntTSL 311.26□□□□□ -0.618e-8■■■■■ 50.5
XRN2Q9H0D6 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC11.19□□□□□ -0.626e-9■■■■■ 50.5
XRN2Q9H0D6 RPS2-214ENST00000533186 625 ntTSL 311.03□□□□□ -0.646e-9■■■■■ 50.5
XRN2Q9H0D6 RPS2-212ENST00000532746 931 ntTSL 310.78□□□□□ -0.686e-9■■■■■ 50.5
XRN2Q9H0D6 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.716e-9■■■■■ 50.5
XRN2Q9H0D6 RERE-207ENST00000464972 743 ntTSL 510.45□□□□□ -0.746e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-206ENST00000537392 2038 ntTSL 210.15□□□□□ -0.786e-9■■■■■ 50.5
XRN2Q9H0D6 AC244636.2-201ENST00000448031 1669 ntBASIC10.14□□□□□ -0.796e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.846e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-203ENST00000379073 3671 ntTSL 27.47□□□□□ -1.216e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.276e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.286e-9■■■■■ 50.5
XRN2Q9H0D6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.85□□□□□ -1.316e-9■■■■■ 50.5
XRN2Q9H0D6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.446e-9■■■■■ 50.5
XRN2Q9H0D6 RNU6-707P-201ENST00000364647 95 ntBASIC4.74□□□□□ -1.656e-9■■■■■ 50.5
XRN2Q9H0D6 RNU2-36P-201ENST00000410361 191 ntBASIC3.6□□□□□ -1.836e-9■■■■■ 50.5
XRN2Q9H0D6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.871e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-206ENST00000478214 716 ntTSL 1 (best)18.29■□□□□ 0.521e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.491e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.481e-11■■■■■ 50.4
XRN2Q9H0D6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-11■■■■■ 50.4
XRN2Q9H0D6 FAM95C-204ENST00000637322 930 ntAPPRIS ALT2 TSL 519.31■□□□□ 0.685e-7■■■■■ 50.3
XRN2Q9H0D6 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC14.98□□□□□ -0.015e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-203ENST00000637288 1965 ntAPPRIS ALT2 TSL 514.29□□□□□ -0.125e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.385e-7■■■■■ 50.3
XRN2Q9H0D6 FAM95C-202ENST00000636756 654 ntTSL 28.11□□□□□ -1.115e-7■■■■■ 50.3
XRN2Q9H0D6 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 328.4■■■□□ 2.143e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.872e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-203ENST00000449710 1070 ntTSL 520.18■□□□□ 0.822e-7■■■■■ 50.1
XRN2Q9H0D6 TRIB3-204ENST00000615226 877 ntTSL 36.66□□□□□ -1.342e-7■■■■■ 50.1
XRN2Q9H0D6 AGO2-203ENST00000518019 421 ntTSL 216.12■□□□□ 0.178e-11■■■■■ 50.1
XRN2Q9H0D6 RICTOR-206ENST00000510711 3126 ntTSL 29.46□□□□□ -0.892e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-209ENST00000514735 686 ntTSL 37.63□□□□□ -1.192e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)6.75□□□□□ -1.332e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.37□□□□□ -1.872e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)3.1□□□□□ -1.912e-12■■■■■ 49.7
XRN2Q9H0D6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.022e-12■■■■■ 49.7
XRN2Q9H0D6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.195e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.075e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.035e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.665e-9■■■■■ 49.6
XRN2Q9H0D6 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.755e-9■■■■■ 49.6
XRN2Q9H0D6 PRKAR1B-208ENST00000456696 518 ntTSL 519.41■□□□□ 0.76e-7■■■■■ 49.1
XRN2Q9H0D6 UBE2Z-204ENST00000506498 766 ntTSL 414.08□□□□□ -0.166e-9■■■■■ 49
XRN2Q9H0D6 RUFY1-207ENST00000502984 658 ntTSL 322.72■■□□□ 1.232e-7■■■■■ 48.7
XRN2Q9H0D6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.92e-7■■■■■ 48.7
XRN2Q9H0D6 RUFY1-203ENST00000393448 2320 ntTSL 1 (best)18.35■□□□□ 0.532e-7■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-213ENST00000611549 4294 ntTSL 513.61□□□□□ -0.234e-8■■■■■ 48.7
XRN2Q9H0D6 C22orf24-202ENST00000486651 823 ntTSL 1 (best)13.27□□□□□ -0.291e-323■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC12.33□□□□□ -0.444e-8■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.554e-8■■■■■ 48.7
XRN2Q9H0D6 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.824e-8■■■■■ 48.7
XRN2Q9H0D6 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC9.95□□□□□ -0.821e-323■■■■■ 48.7
XRN2Q9H0D6 PCK1-205ENST00000485958 581 ntTSL 27.56□□□□□ -1.24e-6■■■■■ 48.7
XRN2Q9H0D6 ANKRD28-202ENST00000412318 4408 ntTSL 24.61□□□□□ -1.674e-11■■■■■ 48.7
XRN2Q9H0D6 CAPZA2-202ENST00000414148 360 ntTSL 520.19■□□□□ 0.824e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-211ENST00000484325 324 ntTSL 1 (best)11.53□□□□□ -0.564e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.714e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-206ENST00000461878 621 ntTSL 1 (best)8.66□□□□□ -1.024e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.34□□□□□ -1.554e-15■■■■■ 48.6
XRN2Q9H0D6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.38□□□□□ -1.714e-15■■■■■ 48.6
Retrieved 100 of 21,068 protein–RNA pairs in 381.7 ms