Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COMMD4Q9H0A8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COMMD4Q9H0A8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD4Q9H0A8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.04■■□□□ 1.28
COMMD4Q9H0A8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COMMD4Q9H0A8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COMMD4Q9H0A8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COMMD4Q9H0A8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COMMD4Q9H0A8 AL139393.2-201ENST00000608721 2025 ntBASIC23.03■■□□□ 1.28
COMMD4Q9H0A8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.02■■□□□ 1.28
COMMD4Q9H0A8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23■■□□□ 1.27
COMMD4Q9H0A8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
COMMD4Q9H0A8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COMMD4Q9H0A8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COMMD4Q9H0A8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COMMD4Q9H0A8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COMMD4Q9H0A8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COMMD4Q9H0A8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COMMD4Q9H0A8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COMMD4Q9H0A8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COMMD4Q9H0A8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.96■■□□□ 1.27
COMMD4Q9H0A8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COMMD4Q9H0A8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COMMD4Q9H0A8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COMMD4Q9H0A8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COMMD4Q9H0A8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COMMD4Q9H0A8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 AL133380.1-201ENST00000506013 324 ntBASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COMMD4Q9H0A8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COMMD4Q9H0A8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COMMD4Q9H0A8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COMMD4Q9H0A8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COMMD4Q9H0A8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.92■■□□□ 1.26
COMMD4Q9H0A8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.91■■□□□ 1.26
COMMD4Q9H0A8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
COMMD4Q9H0A8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
COMMD4Q9H0A8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COMMD4Q9H0A8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
COMMD4Q9H0A8 DRD5P2-201ENST00000421395 2012 ntBASIC22.9■■□□□ 1.26
COMMD4Q9H0A8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
COMMD4Q9H0A8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COMMD4Q9H0A8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COMMD4Q9H0A8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COMMD4Q9H0A8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 AC010864.1-201ENST00000609407 1511 ntBASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COMMD4Q9H0A8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.86■■□□□ 1.25
COMMD4Q9H0A8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.86■■□□□ 1.25
COMMD4Q9H0A8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
COMMD4Q9H0A8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.85■■□□□ 1.25
COMMD4Q9H0A8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.84■■□□□ 1.25
COMMD4Q9H0A8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.82■■□□□ 1.24
COMMD4Q9H0A8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COMMD4Q9H0A8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
COMMD4Q9H0A8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COMMD4Q9H0A8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.8■■□□□ 1.24
COMMD4Q9H0A8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COMMD4Q9H0A8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COMMD4Q9H0A8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.79■■□□□ 1.24
COMMD4Q9H0A8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.78■■□□□ 1.24
COMMD4Q9H0A8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
COMMD4Q9H0A8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
COMMD4Q9H0A8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COMMD4Q9H0A8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
COMMD4Q9H0A8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD4Q9H0A8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
COMMD4Q9H0A8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD4Q9H0A8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD4Q9H0A8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD4Q9H0A8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COMMD4Q9H0A8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.74■■□□□ 1.23
COMMD4Q9H0A8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COMMD4Q9H0A8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COMMD4Q9H0A8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COMMD4Q9H0A8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.73■■□□□ 1.23
COMMD4Q9H0A8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms