Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VGLL1Q99990 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VGLL1Q99990 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VGLL1Q99990 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.77■□□□□ 0.76
VGLL1Q99990 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VGLL1Q99990 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VGLL1Q99990 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VGLL1Q99990 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 AL139393.2-201ENST00000608721 2025 ntBASIC19.76■□□□□ 0.75
VGLL1Q99990 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VGLL1Q99990 AC142086.6-201ENST00000621154 1765 ntBASIC19.75■□□□□ 0.75
VGLL1Q99990 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VGLL1Q99990 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VGLL1Q99990 AL133380.1-201ENST00000506013 324 ntBASIC19.75■□□□□ 0.75
VGLL1Q99990 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VGLL1Q99990 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VGLL1Q99990 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VGLL1Q99990 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VGLL1Q99990 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VGLL1Q99990 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL1Q99990 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL1Q99990 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.71■□□□□ 0.75
VGLL1Q99990 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL1Q99990 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL1Q99990 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL1Q99990 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL1Q99990 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
VGLL1Q99990 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL1Q99990 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VGLL1Q99990 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL1Q99990 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.68■□□□□ 0.74
VGLL1Q99990 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL1Q99990 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
VGLL1Q99990 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VGLL1Q99990 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL1Q99990 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.67■□□□□ 0.74
VGLL1Q99990 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.67■□□□□ 0.74
VGLL1Q99990 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL1Q99990 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL1Q99990 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL1Q99990 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL1Q99990 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.66■□□□□ 0.74
VGLL1Q99990 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL1Q99990 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL1Q99990 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
VGLL1Q99990 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VGLL1Q99990 DRD5P2-201ENST00000421395 2012 ntBASIC19.64■□□□□ 0.73
VGLL1Q99990 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VGLL1Q99990 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VGLL1Q99990 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VGLL1Q99990 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VGLL1Q99990 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VGLL1Q99990 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.62■□□□□ 0.73
VGLL1Q99990 AC010864.1-201ENST00000609407 1511 ntBASIC19.62■□□□□ 0.73
VGLL1Q99990 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VGLL1Q99990 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
VGLL1Q99990 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VGLL1Q99990 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VGLL1Q99990 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VGLL1Q99990 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VGLL1Q99990 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VGLL1Q99990 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VGLL1Q99990 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.6■□□□□ 0.73
VGLL1Q99990 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VGLL1Q99990 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VGLL1Q99990 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VGLL1Q99990 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
VGLL1Q99990 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VGLL1Q99990 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VGLL1Q99990 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VGLL1Q99990 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VGLL1Q99990 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VGLL1Q99990 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VGLL1Q99990 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
VGLL1Q99990 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VGLL1Q99990 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.55■□□□□ 0.72
VGLL1Q99990 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.54■□□□□ 0.72
VGLL1Q99990 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.54■□□□□ 0.72
VGLL1Q99990 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VGLL1Q99990 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VGLL1Q99990 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.53■□□□□ 0.72
VGLL1Q99990 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VGLL1Q99990 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VGLL1Q99990 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VGLL1Q99990 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.52■□□□□ 0.72
VGLL1Q99990 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.52■□□□□ 0.72
VGLL1Q99990 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VGLL1Q99990 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.51■□□□□ 0.71
VGLL1Q99990 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VGLL1Q99990 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VGLL1Q99990 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VGLL1Q99990 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VGLL1Q99990 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
VGLL1Q99990 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VGLL1Q99990 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VGLL1Q99990 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms