Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SMR3AQ99954 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMR3AQ99954 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.13■■□□□ 1.13
SMR3AQ99954 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.13■■□□□ 1.13
SMR3AQ99954 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.13■■□□□ 1.13
SMR3AQ99954 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMR3AQ99954 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.1■■□□□ 1.13
SMR3AQ99954 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SMR3AQ99954 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMR3AQ99954 RNF126P1-201ENST00000567452 1320 ntBASIC22.08■■□□□ 1.13
SMR3AQ99954 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.08■■□□□ 1.13
SMR3AQ99954 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 AC012354.3-201ENST00000623734 483 ntBASIC22.06■■□□□ 1.12
SMR3AQ99954 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMR3AQ99954 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMR3AQ99954 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.05■■□□□ 1.12
SMR3AQ99954 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.05■■□□□ 1.12
SMR3AQ99954 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.04■■□□□ 1.12
SMR3AQ99954 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SMR3AQ99954 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SMR3AQ99954 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SMR3AQ99954 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMR3AQ99954 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.02■■□□□ 1.12
SMR3AQ99954 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SMR3AQ99954 NTF6A-201ENST00000591175 560 ntBASIC22.02■■□□□ 1.12
SMR3AQ99954 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMR3AQ99954 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SMR3AQ99954 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22■■□□□ 1.11
SMR3AQ99954 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.99■■□□□ 1.11
SMR3AQ99954 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SMR3AQ99954 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMR3AQ99954 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.98■■□□□ 1.11
SMR3AQ99954 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMR3AQ99954 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.97■■□□□ 1.11
SMR3AQ99954 AL033527.3-201ENST00000566366 1196 ntBASIC21.97■■□□□ 1.11
SMR3AQ99954 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.97■■□□□ 1.11
SMR3AQ99954 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMR3AQ99954 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
SMR3AQ99954 AC008813.1-201ENST00000536597 885 ntBASIC21.95■■□□□ 1.1
SMR3AQ99954 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.94■■□□□ 1.1
SMR3AQ99954 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMR3AQ99954 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SMR3AQ99954 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMR3AQ99954 AC018358.1-201ENST00000631079 1402 ntBASIC21.93■■□□□ 1.1
SMR3AQ99954 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.92■■□□□ 1.1
SMR3AQ99954 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMR3AQ99954 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMR3AQ99954 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
SMR3AQ99954 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.92■■□□□ 1.1
SMR3AQ99954 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMR3AQ99954 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SMR3AQ99954 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.89■■□□□ 1.1
SMR3AQ99954 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMR3AQ99954 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SMR3AQ99954 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMR3AQ99954 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 AC022413.1-201ENST00000624602 984 ntBASIC21.88■■□□□ 1.09
SMR3AQ99954 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMR3AQ99954 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.88■■□□□ 1.09
SMR3AQ99954 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMR3AQ99954 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.85■■□□□ 1.09
SMR3AQ99954 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.83■■□□□ 1.09
SMR3AQ99954 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMR3AQ99954 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMR3AQ99954 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SMR3AQ99954 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SMR3AQ99954 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMR3AQ99954 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.8■■□□□ 1.08
SMR3AQ99954 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.78■■□□□ 1.08
SMR3AQ99954 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMR3AQ99954 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMR3AQ99954 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.77■■□□□ 1.08
SMR3AQ99954 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMR3AQ99954 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMR3AQ99954 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMR3AQ99954 U85056.1-201ENST00000616429 682 ntBASIC21.75■■□□□ 1.07
SMR3AQ99954 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.74■■□□□ 1.07
SMR3AQ99954 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMR3AQ99954 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMR3AQ99954 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMR3AQ99954 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.73■■□□□ 1.07
SMR3AQ99954 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMR3AQ99954 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.73■■□□□ 1.07
SMR3AQ99954 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.73■■□□□ 1.07
SMR3AQ99954 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms