Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NAF1Q96HR8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NAF1Q96HR8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NAF1Q96HR8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NAF1Q96HR8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.18■■□□□ 1.78
NAF1Q96HR8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.18■■□□□ 1.78
NAF1Q96HR8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.18■■□□□ 1.78
NAF1Q96HR8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NAF1Q96HR8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.18■■□□□ 1.78
NAF1Q96HR8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NAF1Q96HR8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NAF1Q96HR8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NAF1Q96HR8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NAF1Q96HR8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.16■■□□□ 1.78
NAF1Q96HR8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
NAF1Q96HR8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.16■■□□□ 1.78
NAF1Q96HR8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NAF1Q96HR8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.16■■□□□ 1.78
NAF1Q96HR8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.16■■□□□ 1.78
NAF1Q96HR8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NAF1Q96HR8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NAF1Q96HR8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NAF1Q96HR8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NAF1Q96HR8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NAF1Q96HR8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.14■■□□□ 1.77
NAF1Q96HR8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NAF1Q96HR8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NAF1Q96HR8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.13■■□□□ 1.77
NAF1Q96HR8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NAF1Q96HR8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.12■■□□□ 1.77
NAF1Q96HR8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
NAF1Q96HR8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
NAF1Q96HR8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
NAF1Q96HR8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NAF1Q96HR8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.09■■□□□ 1.77
NAF1Q96HR8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NAF1Q96HR8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NAF1Q96HR8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
NAF1Q96HR8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NAF1Q96HR8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NAF1Q96HR8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
NAF1Q96HR8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NAF1Q96HR8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
NAF1Q96HR8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NAF1Q96HR8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.07■■□□□ 1.76
NAF1Q96HR8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.07■■□□□ 1.76
NAF1Q96HR8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NAF1Q96HR8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.06■■□□□ 1.76
NAF1Q96HR8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
NAF1Q96HR8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NAF1Q96HR8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NAF1Q96HR8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NAF1Q96HR8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.05■■□□□ 1.76
NAF1Q96HR8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NAF1Q96HR8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NAF1Q96HR8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NAF1Q96HR8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NAF1Q96HR8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NAF1Q96HR8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.04■■□□□ 1.76
NAF1Q96HR8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.03■■□□□ 1.76
NAF1Q96HR8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NAF1Q96HR8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NAF1Q96HR8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NAF1Q96HR8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NAF1Q96HR8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NAF1Q96HR8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NAF1Q96HR8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
NAF1Q96HR8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NAF1Q96HR8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26■■□□□ 1.75
NAF1Q96HR8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26■■□□□ 1.75
NAF1Q96HR8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26■■□□□ 1.75
NAF1Q96HR8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.99■■□□□ 1.75
NAF1Q96HR8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
NAF1Q96HR8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.99■■□□□ 1.75
NAF1Q96HR8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NAF1Q96HR8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NAF1Q96HR8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NAF1Q96HR8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
NAF1Q96HR8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
NAF1Q96HR8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.97■■□□□ 1.75
NAF1Q96HR8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NAF1Q96HR8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NAF1Q96HR8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.96■■□□□ 1.75
NAF1Q96HR8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.95■■□□□ 1.75
NAF1Q96HR8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.95■■□□□ 1.74
NAF1Q96HR8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
NAF1Q96HR8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NAF1Q96HR8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.93■■□□□ 1.74
NAF1Q96HR8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.92■■□□□ 1.74
NAF1Q96HR8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NAF1Q96HR8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
NAF1Q96HR8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.92■■□□□ 1.74
NAF1Q96HR8 DUX4L29-201ENST00000425409 679 ntBASIC25.92■■□□□ 1.74
NAF1Q96HR8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NAF1Q96HR8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.92■■□□□ 1.74
NAF1Q96HR8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
NAF1Q96HR8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NAF1Q96HR8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.91■■□□□ 1.74
NAF1Q96HR8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.91■■□□□ 1.74
NAF1Q96HR8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms