Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
STAG1Q8WVM7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
STAG1Q8WVM7 AC010864.1-201ENST00000609407 1511 ntBASIC31.26■■■□□ 2.59
STAG1Q8WVM7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
STAG1Q8WVM7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
STAG1Q8WVM7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.23■■■□□ 2.59
STAG1Q8WVM7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.22■■■□□ 2.59
STAG1Q8WVM7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.22■■■□□ 2.59
STAG1Q8WVM7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.21■■■□□ 2.59
STAG1Q8WVM7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
STAG1Q8WVM7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
STAG1Q8WVM7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
STAG1Q8WVM7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
STAG1Q8WVM7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
STAG1Q8WVM7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
STAG1Q8WVM7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
STAG1Q8WVM7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
STAG1Q8WVM7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
STAG1Q8WVM7 MIR6090-201ENST00000622481 60 ntBASIC31.18■■■□□ 2.58
STAG1Q8WVM7 AC108673.1-201ENST00000510422 1159 ntBASIC31.17■■■□□ 2.58
STAG1Q8WVM7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.17■■■□□ 2.58
STAG1Q8WVM7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
STAG1Q8WVM7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.16■■■□□ 2.58
STAG1Q8WVM7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
STAG1Q8WVM7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
STAG1Q8WVM7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
STAG1Q8WVM7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
STAG1Q8WVM7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
STAG1Q8WVM7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
STAG1Q8WVM7 ABHD17AP4-201ENST00000411545 909 ntBASIC31.13■■■□□ 2.57
STAG1Q8WVM7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.13■■■□□ 2.57
STAG1Q8WVM7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
STAG1Q8WVM7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.12■■■□□ 2.57
STAG1Q8WVM7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.11■■■□□ 2.57
STAG1Q8WVM7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
STAG1Q8WVM7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
STAG1Q8WVM7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
STAG1Q8WVM7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.1■■■□□ 2.57
STAG1Q8WVM7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
STAG1Q8WVM7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
STAG1Q8WVM7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
STAG1Q8WVM7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
STAG1Q8WVM7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
STAG1Q8WVM7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
STAG1Q8WVM7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
STAG1Q8WVM7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
STAG1Q8WVM7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
STAG1Q8WVM7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.04■■■□□ 2.56
STAG1Q8WVM7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
STAG1Q8WVM7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
STAG1Q8WVM7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.02■■■□□ 2.56
STAG1Q8WVM7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
STAG1Q8WVM7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
STAG1Q8WVM7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.99■■■□□ 2.55
STAG1Q8WVM7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
STAG1Q8WVM7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
STAG1Q8WVM7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
STAG1Q8WVM7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.98■■■□□ 2.55
STAG1Q8WVM7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.98■■■□□ 2.55
STAG1Q8WVM7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
STAG1Q8WVM7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
STAG1Q8WVM7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.97■■■□□ 2.55
STAG1Q8WVM7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.97■■■□□ 2.55
STAG1Q8WVM7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.97■■■□□ 2.55
STAG1Q8WVM7 ABCB10P1-201ENST00000614297 2181 ntBASIC30.97■■■□□ 2.55
STAG1Q8WVM7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
STAG1Q8WVM7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
STAG1Q8WVM7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
STAG1Q8WVM7 MIR7108-201ENST00000614319 87 ntBASIC30.95■■■□□ 2.55
STAG1Q8WVM7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
STAG1Q8WVM7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.94■■■□□ 2.54
STAG1Q8WVM7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.94■■■□□ 2.54
STAG1Q8WVM7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
STAG1Q8WVM7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
STAG1Q8WVM7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
STAG1Q8WVM7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.92■■■□□ 2.54
STAG1Q8WVM7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
STAG1Q8WVM7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
STAG1Q8WVM7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
STAG1Q8WVM7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
STAG1Q8WVM7 AC021231.2-201ENST00000594613 730 ntBASIC30.9■■■□□ 2.54
STAG1Q8WVM7 DUX4L29-201ENST00000425409 679 ntBASIC30.89■■■□□ 2.54
STAG1Q8WVM7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
STAG1Q8WVM7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.89■■■□□ 2.53
STAG1Q8WVM7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.88■■■□□ 2.53
STAG1Q8WVM7 ZNRF2P2-203ENST00000454624 420 ntBASIC30.88■■■□□ 2.53
STAG1Q8WVM7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.88■■■□□ 2.53
STAG1Q8WVM7 AC127502.1-201ENST00000399971 1502 ntBASIC30.88■■■□□ 2.53
STAG1Q8WVM7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
STAG1Q8WVM7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
STAG1Q8WVM7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
STAG1Q8WVM7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.87■■■□□ 2.53
STAG1Q8WVM7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
STAG1Q8WVM7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.87■■■□□ 2.53
STAG1Q8WVM7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
STAG1Q8WVM7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
STAG1Q8WVM7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
STAG1Q8WVM7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
STAG1Q8WVM7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
STAG1Q8WVM7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms