Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.67■■■□□ 2.66
SH3RF3Q8TEJ3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SH3RF3Q8TEJ3 HLA-V-202ENST00000446817 847 ntBASIC31.65■■■□□ 2.66
SH3RF3Q8TEJ3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
SH3RF3Q8TEJ3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SH3RF3Q8TEJ3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SH3RF3Q8TEJ3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SH3RF3Q8TEJ3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
SH3RF3Q8TEJ3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SH3RF3Q8TEJ3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SH3RF3Q8TEJ3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.62■■■□□ 2.65
SH3RF3Q8TEJ3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.61■■■□□ 2.65
SH3RF3Q8TEJ3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.61■■■□□ 2.65
SH3RF3Q8TEJ3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SH3RF3Q8TEJ3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.59■■■□□ 2.65
SH3RF3Q8TEJ3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SH3RF3Q8TEJ3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
SH3RF3Q8TEJ3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SH3RF3Q8TEJ3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.57■■■□□ 2.65
SH3RF3Q8TEJ3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SH3RF3Q8TEJ3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.56■■■□□ 2.64
SH3RF3Q8TEJ3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SH3RF3Q8TEJ3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SH3RF3Q8TEJ3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.54■■■□□ 2.64
SH3RF3Q8TEJ3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
SH3RF3Q8TEJ3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SH3RF3Q8TEJ3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.52■■■□□ 2.64
SH3RF3Q8TEJ3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
SH3RF3Q8TEJ3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SH3RF3Q8TEJ3 AC010864.1-201ENST00000609407 1511 ntBASIC31.5■■■□□ 2.63
SH3RF3Q8TEJ3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.5■■■□□ 2.63
SH3RF3Q8TEJ3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SH3RF3Q8TEJ3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SH3RF3Q8TEJ3 LINC01971-201ENST00000617888 1048 ntBASIC31.49■■■□□ 2.63
SH3RF3Q8TEJ3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SH3RF3Q8TEJ3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SH3RF3Q8TEJ3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SH3RF3Q8TEJ3 DUX4L11-201ENST00000611504 1267 ntBASIC31.47■■■□□ 2.63
SH3RF3Q8TEJ3 DUX4L12-201ENST00000614593 1267 ntBASIC31.47■■■□□ 2.63
SH3RF3Q8TEJ3 DUX4L14-201ENST00000621227 1267 ntBASIC31.47■■■□□ 2.63
SH3RF3Q8TEJ3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SH3RF3Q8TEJ3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
SH3RF3Q8TEJ3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.46■■■□□ 2.63
SH3RF3Q8TEJ3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.46■■■□□ 2.63
SH3RF3Q8TEJ3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.46■■■□□ 2.63
SH3RF3Q8TEJ3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.45■■■□□ 2.63
SH3RF3Q8TEJ3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SH3RF3Q8TEJ3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
SH3RF3Q8TEJ3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SH3RF3Q8TEJ3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.42■■■□□ 2.62
SH3RF3Q8TEJ3 MIR3648-2-201ENST00000581792 180 ntBASIC31.42■■■□□ 2.62
SH3RF3Q8TEJ3 MIR3648-1-201ENST00000615959 180 ntBASIC31.42■■■□□ 2.62
SH3RF3Q8TEJ3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.42■■■□□ 2.62
SH3RF3Q8TEJ3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.41■■■□□ 2.62
SH3RF3Q8TEJ3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.41■■■□□ 2.62
SH3RF3Q8TEJ3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.4■■■□□ 2.62
SH3RF3Q8TEJ3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.4■■■□□ 2.62
SH3RF3Q8TEJ3 AC016575.1-201ENST00000607026 382 ntBASIC31.4■■■□□ 2.62
SH3RF3Q8TEJ3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SH3RF3Q8TEJ3 CR559946.2-201ENST00000623684 991 ntBASIC31.39■■■□□ 2.62
SH3RF3Q8TEJ3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3RF3Q8TEJ3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3RF3Q8TEJ3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3RF3Q8TEJ3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.37■■■□□ 2.61
SH3RF3Q8TEJ3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SH3RF3Q8TEJ3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
SH3RF3Q8TEJ3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH3RF3Q8TEJ3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH3RF3Q8TEJ3 MIR639-201ENST00000384974 98 ntBASIC31.35■■■□□ 2.61
SH3RF3Q8TEJ3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.35■■■□□ 2.61
SH3RF3Q8TEJ3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3RF3Q8TEJ3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH3RF3Q8TEJ3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SH3RF3Q8TEJ3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
SH3RF3Q8TEJ3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
SH3RF3Q8TEJ3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 AL135925.1-201ENST00000605920 1701 ntBASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SH3RF3Q8TEJ3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH3RF3Q8TEJ3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SH3RF3Q8TEJ3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH3RF3Q8TEJ3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.28■■■□□ 2.6
SH3RF3Q8TEJ3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH3RF3Q8TEJ3 MIR4449-201ENST00000578365 66 ntBASIC31.28■■■□□ 2.6
SH3RF3Q8TEJ3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3RF3Q8TEJ3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SH3RF3Q8TEJ3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SH3RF3Q8TEJ3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L13-201ENST00000554103 1267 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L15-201ENST00000611059 1267 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms