Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC010864.1-201ENST00000609407 1511 ntBASIC27.26■■□□□ 1.96
PCDH19Q8TAB3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
PCDH19Q8TAB3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
PCDH19Q8TAB3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PCDH19Q8TAB3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
PCDH19Q8TAB3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH19Q8TAB3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDH19Q8TAB3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH19Q8TAB3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCDH19Q8TAB3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PCDH19Q8TAB3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH19Q8TAB3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PCDH19Q8TAB3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH19Q8TAB3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH19Q8TAB3 MIR762-201ENST00000390236 83 ntBASIC27.19■■□□□ 1.94
PCDH19Q8TAB3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH19Q8TAB3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDH19Q8TAB3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH19Q8TAB3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH19Q8TAB3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH19Q8TAB3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH19Q8TAB3 RPS2P35-201ENST00000443417 897 ntBASIC27.16■■□□□ 1.94
PCDH19Q8TAB3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH19Q8TAB3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH19Q8TAB3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
PCDH19Q8TAB3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDH19Q8TAB3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH19Q8TAB3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDH19Q8TAB3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH19Q8TAB3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.13■■□□□ 1.93
PCDH19Q8TAB3 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDH19Q8TAB3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH19Q8TAB3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH19Q8TAB3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH19Q8TAB3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH19Q8TAB3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.12■■□□□ 1.93
PCDH19Q8TAB3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
PCDH19Q8TAB3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH19Q8TAB3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDH19Q8TAB3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDH19Q8TAB3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDH19Q8TAB3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDH19Q8TAB3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDH19Q8TAB3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDH19Q8TAB3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDH19Q8TAB3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PCDH19Q8TAB3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH19Q8TAB3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH19Q8TAB3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
PCDH19Q8TAB3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDH19Q8TAB3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDH19Q8TAB3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDH19Q8TAB3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
PCDH19Q8TAB3 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.07■■□□□ 1.92
PCDH19Q8TAB3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDH19Q8TAB3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDH19Q8TAB3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDH19Q8TAB3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.05■■□□□ 1.92
PCDH19Q8TAB3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDH19Q8TAB3 AL139393.2-201ENST00000608721 2025 ntBASIC27.04■■□□□ 1.92
PCDH19Q8TAB3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH19Q8TAB3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.02■■□□□ 1.92
PCDH19Q8TAB3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH19Q8TAB3 AC005559.1-201ENST00000589661 871 ntBASIC27.01■■□□□ 1.91
PCDH19Q8TAB3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH19Q8TAB3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH19Q8TAB3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
PCDH19Q8TAB3 AL162393.1-201ENST00000437852 946 ntBASIC27■■□□□ 1.91
PCDH19Q8TAB3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH19Q8TAB3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH19Q8TAB3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 AP006261.1-201ENST00000584783 668 ntBASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
PCDH19Q8TAB3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.96■■□□□ 1.91
PCDH19Q8TAB3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDH19Q8TAB3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.96■■□□□ 1.91
PCDH19Q8TAB3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDH19Q8TAB3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDH19Q8TAB3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDH19Q8TAB3 DUX4L28-201ENST00000623687 678 ntBASIC26.94■■□□□ 1.9
PCDH19Q8TAB3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH19Q8TAB3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH19Q8TAB3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDH19Q8TAB3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH19Q8TAB3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH19Q8TAB3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH19Q8TAB3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH19Q8TAB3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms