Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.03■■□□□ 1.76
PHC3Q8NDX5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 DUX4L28-201ENST00000623687 678 ntBASIC26.02■■□□□ 1.76
PHC3Q8NDX5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26■■□□□ 1.75
PHC3Q8NDX5 MIR3665-201ENST00000578708 105 ntBASIC26■■□□□ 1.75
PHC3Q8NDX5 AC135731.1-201ENST00000569415 2548 ntBASIC25.99■■□□□ 1.75
PHC3Q8NDX5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PHC3Q8NDX5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PHC3Q8NDX5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.98■■□□□ 1.75
PHC3Q8NDX5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PHC3Q8NDX5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PHC3Q8NDX5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
PHC3Q8NDX5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.95■■□□□ 1.74
PHC3Q8NDX5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
PHC3Q8NDX5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.94■■□□□ 1.74
PHC3Q8NDX5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PHC3Q8NDX5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.9■■□□□ 1.74
PHC3Q8NDX5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PHC3Q8NDX5 AC087741.3-201ENST00000624270 1347 ntBASIC25.89■■□□□ 1.74
PHC3Q8NDX5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHC3Q8NDX5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PHC3Q8NDX5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
PHC3Q8NDX5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PHC3Q8NDX5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.87■■□□□ 1.73
PHC3Q8NDX5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.86■■□□□ 1.73
PHC3Q8NDX5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PHC3Q8NDX5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.83■■□□□ 1.72
PHC3Q8NDX5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHC3Q8NDX5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
PHC3Q8NDX5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.79■■□□□ 1.72
PHC3Q8NDX5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 AL135925.1-201ENST00000605920 1701 ntBASIC25.75■■□□□ 1.71
PHC3Q8NDX5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 AC044849.2-201ENST00000606596 710 ntBASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms