Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC9BQ8N6N2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC9BQ8N6N2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TTC9BQ8N6N2 HLA-V-202ENST00000446817 847 ntBASIC27.92■■■□□ 2.06
TTC9BQ8N6N2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
TTC9BQ8N6N2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.92■■■□□ 2.06
TTC9BQ8N6N2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
TTC9BQ8N6N2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TTC9BQ8N6N2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
TTC9BQ8N6N2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
TTC9BQ8N6N2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.9■■■□□ 2.06
TTC9BQ8N6N2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
TTC9BQ8N6N2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
TTC9BQ8N6N2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TTC9BQ8N6N2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.88■■■□□ 2.05
TTC9BQ8N6N2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.88■■■□□ 2.05
TTC9BQ8N6N2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TTC9BQ8N6N2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
TTC9BQ8N6N2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TTC9BQ8N6N2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.86■■■□□ 2.05
TTC9BQ8N6N2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
TTC9BQ8N6N2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.85■■■□□ 2.05
TTC9BQ8N6N2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.84■■■□□ 2.05
TTC9BQ8N6N2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TTC9BQ8N6N2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TTC9BQ8N6N2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
TTC9BQ8N6N2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TTC9BQ8N6N2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.83■■■□□ 2.05
TTC9BQ8N6N2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TTC9BQ8N6N2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
TTC9BQ8N6N2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
TTC9BQ8N6N2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TTC9BQ8N6N2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.8■■■□□ 2.04
TTC9BQ8N6N2 AC010864.1-201ENST00000609407 1511 ntBASIC27.8■■■□□ 2.04
TTC9BQ8N6N2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TTC9BQ8N6N2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TTC9BQ8N6N2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.79■■■□□ 2.04
TTC9BQ8N6N2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
TTC9BQ8N6N2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TTC9BQ8N6N2 LINC01971-201ENST00000617888 1048 ntBASIC27.76■■■□□ 2.03
TTC9BQ8N6N2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
TTC9BQ8N6N2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.76■■■□□ 2.03
TTC9BQ8N6N2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TTC9BQ8N6N2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TTC9BQ8N6N2 DUX4L11-201ENST00000611504 1267 ntBASIC27.75■■■□□ 2.03
TTC9BQ8N6N2 DUX4L12-201ENST00000614593 1267 ntBASIC27.75■■■□□ 2.03
TTC9BQ8N6N2 DUX4L14-201ENST00000621227 1267 ntBASIC27.75■■■□□ 2.03
TTC9BQ8N6N2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.74■■■□□ 2.03
TTC9BQ8N6N2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.73■■■□□ 2.03
TTC9BQ8N6N2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
TTC9BQ8N6N2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TTC9BQ8N6N2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.73■■■□□ 2.03
TTC9BQ8N6N2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TTC9BQ8N6N2 AC016575.1-201ENST00000607026 382 ntBASIC27.71■■■□□ 2.03
TTC9BQ8N6N2 CR559946.2-201ENST00000623684 991 ntBASIC27.71■■■□□ 2.03
TTC9BQ8N6N2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.7■■■□□ 2.02
TTC9BQ8N6N2 MIR3648-2-201ENST00000581792 180 ntBASIC27.7■■■□□ 2.02
TTC9BQ8N6N2 MIR3648-1-201ENST00000615959 180 ntBASIC27.7■■■□□ 2.02
TTC9BQ8N6N2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TTC9BQ8N6N2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.69■■■□□ 2.02
TTC9BQ8N6N2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.69■■■□□ 2.02
TTC9BQ8N6N2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.69■■■□□ 2.02
TTC9BQ8N6N2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TTC9BQ8N6N2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.68■■■□□ 2.02
TTC9BQ8N6N2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.68■■■□□ 2.02
TTC9BQ8N6N2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC9BQ8N6N2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC9BQ8N6N2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC9BQ8N6N2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC9BQ8N6N2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.66■■■□□ 2.02
TTC9BQ8N6N2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
TTC9BQ8N6N2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TTC9BQ8N6N2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.64■■■□□ 2.02
TTC9BQ8N6N2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.64■■■□□ 2.02
TTC9BQ8N6N2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
TTC9BQ8N6N2 MIR639-201ENST00000384974 98 ntBASIC27.62■■■□□ 2.01
TTC9BQ8N6N2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 AL135925.1-201ENST00000605920 1701 ntBASIC27.61■■■□□ 2.01
TTC9BQ8N6N2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TTC9BQ8N6N2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TTC9BQ8N6N2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC9BQ8N6N2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC9BQ8N6N2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.59■■■□□ 2.01
TTC9BQ8N6N2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC9BQ8N6N2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TTC9BQ8N6N2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TTC9BQ8N6N2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.58■■■□□ 2.01
TTC9BQ8N6N2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.57■■■□□ 2
TTC9BQ8N6N2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.57■■■□□ 2
TTC9BQ8N6N2 MIR4449-201ENST00000578365 66 ntBASIC27.57■■■□□ 2
TTC9BQ8N6N2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.57■■■□□ 2
TTC9BQ8N6N2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.56■■■□□ 2
TTC9BQ8N6N2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.56■■■□□ 2
TTC9BQ8N6N2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms