Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.18■■□□□ 1.78
TRAM1L1Q8N609 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRAM1L1Q8N609 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRAM1L1Q8N609 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
TRAM1L1Q8N609 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.16■■□□□ 1.78
TRAM1L1Q8N609 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRAM1L1Q8N609 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
TRAM1L1Q8N609 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRAM1L1Q8N609 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
TRAM1L1Q8N609 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.13■■□□□ 1.77
TRAM1L1Q8N609 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRAM1L1Q8N609 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRAM1L1Q8N609 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRAM1L1Q8N609 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAM1L1Q8N609 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
TRAM1L1Q8N609 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.11■■□□□ 1.77
TRAM1L1Q8N609 MIR6090-201ENST00000622481 60 ntBASIC26.11■■□□□ 1.77
TRAM1L1Q8N609 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.11■■□□□ 1.77
TRAM1L1Q8N609 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRAM1L1Q8N609 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.1■■□□□ 1.77
TRAM1L1Q8N609 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRAM1L1Q8N609 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
TRAM1L1Q8N609 ST7-AS1-201ENST00000456775 1889 ntBASIC26.08■■□□□ 1.77
TRAM1L1Q8N609 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAM1L1Q8N609 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAM1L1Q8N609 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TRAM1L1Q8N609 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRAM1L1Q8N609 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRAM1L1Q8N609 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
TRAM1L1Q8N609 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.06■■□□□ 1.76
TRAM1L1Q8N609 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRAM1L1Q8N609 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAM1L1Q8N609 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAM1L1Q8N609 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAM1L1Q8N609 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAM1L1Q8N609 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRAM1L1Q8N609 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.04■■□□□ 1.76
TRAM1L1Q8N609 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.03■■□□□ 1.76
TRAM1L1Q8N609 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.03■■□□□ 1.76
TRAM1L1Q8N609 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.02■■□□□ 1.76
TRAM1L1Q8N609 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26■■□□□ 1.75
TRAM1L1Q8N609 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRAM1L1Q8N609 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRAM1L1Q8N609 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRAM1L1Q8N609 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRAM1L1Q8N609 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TRAM1L1Q8N609 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TRAM1L1Q8N609 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRAM1L1Q8N609 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.93■■□□□ 1.74
TRAM1L1Q8N609 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRAM1L1Q8N609 DUX4L29-201ENST00000425409 679 ntBASIC25.93■■□□□ 1.74
TRAM1L1Q8N609 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.92■■□□□ 1.74
TRAM1L1Q8N609 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.92■■□□□ 1.74
TRAM1L1Q8N609 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
TRAM1L1Q8N609 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.91■■□□□ 1.74
TRAM1L1Q8N609 AC021231.2-201ENST00000594613 730 ntBASIC25.91■■□□□ 1.74
TRAM1L1Q8N609 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRAM1L1Q8N609 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRAM1L1Q8N609 ABCB10P1-201ENST00000614297 2181 ntBASIC25.9■■□□□ 1.74
TRAM1L1Q8N609 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TRAM1L1Q8N609 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.9■■□□□ 1.74
TRAM1L1Q8N609 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.9■■□□□ 1.74
TRAM1L1Q8N609 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRAM1L1Q8N609 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRAM1L1Q8N609 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
TRAM1L1Q8N609 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
TRAM1L1Q8N609 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 AC127502.1-201ENST00000399971 1502 ntBASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRAM1L1Q8N609 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRAM1L1Q8N609 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.87■■□□□ 1.73
TRAM1L1Q8N609 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TRAM1L1Q8N609 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.87■■□□□ 1.73
TRAM1L1Q8N609 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRAM1L1Q8N609 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRAM1L1Q8N609 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.86■■□□□ 1.73
TRAM1L1Q8N609 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TRAM1L1Q8N609 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
TRAM1L1Q8N609 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRAM1L1Q8N609 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
TRAM1L1Q8N609 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRAM1L1Q8N609 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRAM1L1Q8N609 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.83■■□□□ 1.72
TRAM1L1Q8N609 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRAM1L1Q8N609 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRAM1L1Q8N609 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRAM1L1Q8N609 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms