Protein–RNA interactions for Protein: Q6PJ21

SPSB3, SPRY domain-containing SOCS box protein 3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3Q6PJ21 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.14■□□□□ 0.97
SPSB3Q6PJ21 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.14■□□□□ 0.97
SPSB3Q6PJ21 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPSB3Q6PJ21 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPSB3Q6PJ21 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPSB3Q6PJ21 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.12■□□□□ 0.97
SPSB3Q6PJ21 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPSB3Q6PJ21 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPSB3Q6PJ21 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPSB3Q6PJ21 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPSB3Q6PJ21 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.11■□□□□ 0.97
SPSB3Q6PJ21 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPSB3Q6PJ21 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SPSB3Q6PJ21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPSB3Q6PJ21 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPSB3Q6PJ21 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPSB3Q6PJ21 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPSB3Q6PJ21 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.05■□□□□ 0.96
SPSB3Q6PJ21 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.05■□□□□ 0.96
SPSB3Q6PJ21 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPSB3Q6PJ21 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPSB3Q6PJ21 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SPSB3Q6PJ21 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.03■□□□□ 0.96
SPSB3Q6PJ21 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPSB3Q6PJ21 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPSB3Q6PJ21 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.02■□□□□ 0.96
SPSB3Q6PJ21 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPSB3Q6PJ21 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPSB3Q6PJ21 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPSB3Q6PJ21 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SPSB3Q6PJ21 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPSB3Q6PJ21 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21■□□□□ 0.95
SPSB3Q6PJ21 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SPSB3Q6PJ21 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21■□□□□ 0.95
SPSB3Q6PJ21 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPSB3Q6PJ21 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPSB3Q6PJ21 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
SPSB3Q6PJ21 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPSB3Q6PJ21 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPSB3Q6PJ21 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPSB3Q6PJ21 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPSB3Q6PJ21 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SPSB3Q6PJ21 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SPSB3Q6PJ21 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPSB3Q6PJ21 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPSB3Q6PJ21 DRD5P2-201ENST00000421395 2012 ntBASIC20.94■□□□□ 0.94
SPSB3Q6PJ21 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.94■□□□□ 0.94
SPSB3Q6PJ21 RARRES2P7-201ENST00000567349 469 ntBASIC20.94■□□□□ 0.94
SPSB3Q6PJ21 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.94■□□□□ 0.94
SPSB3Q6PJ21 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SPSB3Q6PJ21 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPSB3Q6PJ21 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPSB3Q6PJ21 AL133380.1-201ENST00000506013 324 ntBASIC20.92■□□□□ 0.94
SPSB3Q6PJ21 AL135925.1-201ENST00000605920 1701 ntBASIC20.91■□□□□ 0.94
SPSB3Q6PJ21 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPSB3Q6PJ21 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPSB3Q6PJ21 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SPSB3Q6PJ21 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.9■□□□□ 0.94
SPSB3Q6PJ21 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPSB3Q6PJ21 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPSB3Q6PJ21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SPSB3Q6PJ21 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPSB3Q6PJ21 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPSB3Q6PJ21 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPSB3Q6PJ21 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SPSB3Q6PJ21 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPSB3Q6PJ21 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPSB3Q6PJ21 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SPSB3Q6PJ21 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPSB3Q6PJ21 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPSB3Q6PJ21 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
SPSB3Q6PJ21 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SPSB3Q6PJ21 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 WASH5P-204ENST00000632292 975 ntBASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPSB3Q6PJ21 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SPSB3Q6PJ21 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPSB3Q6PJ21 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SPSB3Q6PJ21 SETD8P1-201ENST00000623146 1180 ntBASIC20.84■□□□□ 0.93
SPSB3Q6PJ21 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPSB3Q6PJ21 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms