Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AL031258.1-201ENST00000623562 325 ntBASIC20.66■□□□□ 0.9
FAM78BQ5VT40 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM78BQ5VT40 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM78BQ5VT40 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM78BQ5VT40 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.64■□□□□ 0.9
FAM78BQ5VT40 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
FAM78BQ5VT40 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FAM78BQ5VT40 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FAM78BQ5VT40 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FAM78BQ5VT40 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.63■□□□□ 0.89
FAM78BQ5VT40 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.63■□□□□ 0.89
FAM78BQ5VT40 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM78BQ5VT40 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FAM78BQ5VT40 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.62■□□□□ 0.89
FAM78BQ5VT40 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FAM78BQ5VT40 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FAM78BQ5VT40 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FAM78BQ5VT40 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM78BQ5VT40 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FAM78BQ5VT40 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FAM78BQ5VT40 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FAM78BQ5VT40 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FAM78BQ5VT40 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FAM78BQ5VT40 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FAM78BQ5VT40 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FAM78BQ5VT40 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FAM78BQ5VT40 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FAM78BQ5VT40 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FAM78BQ5VT40 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FAM78BQ5VT40 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FAM78BQ5VT40 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FAM78BQ5VT40 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FAM78BQ5VT40 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.56■□□□□ 0.88
FAM78BQ5VT40 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FAM78BQ5VT40 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM78BQ5VT40 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM78BQ5VT40 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.54■□□□□ 0.88
FAM78BQ5VT40 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM78BQ5VT40 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
FAM78BQ5VT40 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
FAM78BQ5VT40 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.53■□□□□ 0.88
FAM78BQ5VT40 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FAM78BQ5VT40 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM78BQ5VT40 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM78BQ5VT40 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FAM78BQ5VT40 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.52■□□□□ 0.88
FAM78BQ5VT40 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM78BQ5VT40 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FAM78BQ5VT40 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FAM78BQ5VT40 AL139393.2-201ENST00000608721 2025 ntBASIC20.51■□□□□ 0.87
FAM78BQ5VT40 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM78BQ5VT40 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM78BQ5VT40 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FAM78BQ5VT40 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FAM78BQ5VT40 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
FAM78BQ5VT40 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FAM78BQ5VT40 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
FAM78BQ5VT40 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FAM78BQ5VT40 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FAM78BQ5VT40 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.47■□□□□ 0.87
FAM78BQ5VT40 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
FAM78BQ5VT40 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.46■□□□□ 0.87
FAM78BQ5VT40 DRD5P2-201ENST00000421395 2012 ntBASIC20.46■□□□□ 0.87
FAM78BQ5VT40 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FAM78BQ5VT40 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FAM78BQ5VT40 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.44■□□□□ 0.86
FAM78BQ5VT40 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FAM78BQ5VT40 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FAM78BQ5VT40 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FAM78BQ5VT40 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FAM78BQ5VT40 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.39■□□□□ 0.86
FAM78BQ5VT40 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FAM78BQ5VT40 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FAM78BQ5VT40 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
FAM78BQ5VT40 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM78BQ5VT40 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.38■□□□□ 0.85
FAM78BQ5VT40 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM78BQ5VT40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM78BQ5VT40 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FAM78BQ5VT40 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FAM78BQ5VT40 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms