Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LDLRAD2Q5SZI1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LDLRAD2Q5SZI1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.42■■□□□ 1.02
LDLRAD2Q5SZI1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDLRAD2Q5SZI1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.41■■□□□ 1.02
LDLRAD2Q5SZI1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LDLRAD2Q5SZI1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.4■■□□□ 1.02
LDLRAD2Q5SZI1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.39■■□□□ 1.02
LDLRAD2Q5SZI1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
LDLRAD2Q5SZI1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
LDLRAD2Q5SZI1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LDLRAD2Q5SZI1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LDLRAD2Q5SZI1 AC010864.1-201ENST00000609407 1511 ntBASIC21.39■■□□□ 1.01
LDLRAD2Q5SZI1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDLRAD2Q5SZI1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDLRAD2Q5SZI1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.38■■□□□ 1.01
LDLRAD2Q5SZI1 AC044849.2-201ENST00000606596 710 ntBASIC21.38■■□□□ 1.01
LDLRAD2Q5SZI1 MIR6090-201ENST00000622481 60 ntBASIC21.37■■□□□ 1.01
LDLRAD2Q5SZI1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LDLRAD2Q5SZI1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LDLRAD2Q5SZI1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.36■■□□□ 1.01
LDLRAD2Q5SZI1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 ST7-AS1-201ENST00000456775 1889 ntBASIC21.35■■□□□ 1.01
LDLRAD2Q5SZI1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LDLRAD2Q5SZI1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.34■■□□□ 1.01
LDLRAD2Q5SZI1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LDLRAD2Q5SZI1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LDLRAD2Q5SZI1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
LDLRAD2Q5SZI1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.32■■□□□ 1
LDLRAD2Q5SZI1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LDLRAD2Q5SZI1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LDLRAD2Q5SZI1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LDLRAD2Q5SZI1 ABCB10P1-201ENST00000614297 2181 ntBASIC21.31■■□□□ 1
LDLRAD2Q5SZI1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LDLRAD2Q5SZI1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.3■■□□□ 1
LDLRAD2Q5SZI1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LDLRAD2Q5SZI1 AC108673.1-201ENST00000510422 1159 ntBASIC21.29■■□□□ 1
LDLRAD2Q5SZI1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.28■■□□□ 1
LDLRAD2Q5SZI1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.28■■□□□ 1
LDLRAD2Q5SZI1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD2Q5SZI1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
LDLRAD2Q5SZI1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.27■■□□□ 1
LDLRAD2Q5SZI1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.27■■□□□ 1
LDLRAD2Q5SZI1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD2Q5SZI1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.24■□□□□ 0.99
LDLRAD2Q5SZI1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LDLRAD2Q5SZI1 AC139426.1-201ENST00000568218 2529 ntBASIC21.23■□□□□ 0.99
LDLRAD2Q5SZI1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDLRAD2Q5SZI1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD2Q5SZI1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LDLRAD2Q5SZI1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.22■□□□□ 0.99
LDLRAD2Q5SZI1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD2Q5SZI1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.21■□□□□ 0.99
LDLRAD2Q5SZI1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.2■□□□□ 0.98
LDLRAD2Q5SZI1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD2Q5SZI1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD2Q5SZI1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD2Q5SZI1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD2Q5SZI1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LDLRAD2Q5SZI1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LDLRAD2Q5SZI1 AC021231.2-201ENST00000594613 730 ntBASIC21.18■□□□□ 0.98
LDLRAD2Q5SZI1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD2Q5SZI1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
LDLRAD2Q5SZI1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD2Q5SZI1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD2Q5SZI1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.16■□□□□ 0.98
LDLRAD2Q5SZI1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD2Q5SZI1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
LDLRAD2Q5SZI1 AC127502.1-201ENST00000399971 1502 ntBASIC21.14■□□□□ 0.98
LDLRAD2Q5SZI1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD2Q5SZI1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD2Q5SZI1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.14■□□□□ 0.97
LDLRAD2Q5SZI1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.14■□□□□ 0.97
LDLRAD2Q5SZI1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD2Q5SZI1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LDLRAD2Q5SZI1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms