Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
FREM1Q5H8C1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.33■■□□□ 1.32
FREM1Q5H8C1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FREM1Q5H8C1 ABHD17AP4-201ENST00000411545 909 ntBASIC23.29■■□□□ 1.32
FREM1Q5H8C1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 MIR6090-201ENST00000622481 60 ntBASIC23.28■■□□□ 1.32
FREM1Q5H8C1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.27■■□□□ 1.32
FREM1Q5H8C1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.27■■□□□ 1.32
FREM1Q5H8C1 AL135925.1-201ENST00000605920 1701 ntBASIC23.27■■□□□ 1.32
FREM1Q5H8C1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FREM1Q5H8C1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FREM1Q5H8C1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 AC010864.1-201ENST00000609407 1511 ntBASIC23.25■■□□□ 1.31
FREM1Q5H8C1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.24■■□□□ 1.31
FREM1Q5H8C1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FREM1Q5H8C1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FREM1Q5H8C1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FREM1Q5H8C1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FREM1Q5H8C1 ABCB10P1-201ENST00000614297 2181 ntBASIC23.18■■□□□ 1.3
FREM1Q5H8C1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
FREM1Q5H8C1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
FREM1Q5H8C1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
FREM1Q5H8C1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.14■■□□□ 1.29
FREM1Q5H8C1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
FREM1Q5H8C1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 MIR7108-201ENST00000614319 87 ntBASIC23.13■■□□□ 1.29
FREM1Q5H8C1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 DUX4L29-201ENST00000425409 679 ntBASIC23.12■■□□□ 1.29
FREM1Q5H8C1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.12■■□□□ 1.29
FREM1Q5H8C1 AC021231.2-201ENST00000594613 730 ntBASIC23.11■■□□□ 1.29
FREM1Q5H8C1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.11■■□□□ 1.29
FREM1Q5H8C1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
FREM1Q5H8C1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FREM1Q5H8C1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.08■■□□□ 1.29
FREM1Q5H8C1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FREM1Q5H8C1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
FREM1Q5H8C1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.07■■□□□ 1.28
FREM1Q5H8C1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
FREM1Q5H8C1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
FREM1Q5H8C1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FREM1Q5H8C1 HLA-V-202ENST00000446817 847 ntBASIC23.05■■□□□ 1.28
FREM1Q5H8C1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
FREM1Q5H8C1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms