Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
TDP2O95551 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TDP2O95551 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TDP2O95551 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.95■■■□□ 2.39
TDP2O95551 ST7-AS1-201ENST00000456775 1889 ntBASIC29.94■■■□□ 2.38
TDP2O95551 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TDP2O95551 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TDP2O95551 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
TDP2O95551 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
TDP2O95551 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
TDP2O95551 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TDP2O95551 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TDP2O95551 ABCB10P1-201ENST00000614297 2181 ntBASIC29.92■■■□□ 2.38
TDP2O95551 AC044849.2-201ENST00000606596 710 ntBASIC29.91■■■□□ 2.38
TDP2O95551 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TDP2O95551 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TDP2O95551 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.9■■■□□ 2.38
TDP2O95551 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
TDP2O95551 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
TDP2O95551 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.89■■■□□ 2.38
TDP2O95551 MIR6090-201ENST00000622481 60 ntBASIC29.89■■■□□ 2.38
TDP2O95551 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TDP2O95551 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.88■■■□□ 2.37
TDP2O95551 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
TDP2O95551 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.87■■■□□ 2.37
TDP2O95551 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.87■■■□□ 2.37
TDP2O95551 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
TDP2O95551 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
TDP2O95551 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TDP2O95551 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
TDP2O95551 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TDP2O95551 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.83■■■□□ 2.37
TDP2O95551 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TDP2O95551 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TDP2O95551 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
TDP2O95551 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.82■■■□□ 2.36
TDP2O95551 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
TDP2O95551 AC108673.1-201ENST00000510422 1159 ntBASIC29.81■■■□□ 2.36
TDP2O95551 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.8■■■□□ 2.36
TDP2O95551 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
TDP2O95551 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TDP2O95551 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TDP2O95551 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
TDP2O95551 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TDP2O95551 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
TDP2O95551 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TDP2O95551 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
TDP2O95551 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.75■■■□□ 2.35
TDP2O95551 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.75■■■□□ 2.35
TDP2O95551 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.75■■■□□ 2.35
TDP2O95551 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
TDP2O95551 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TDP2O95551 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TDP2O95551 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TDP2O95551 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.72■■■□□ 2.35
TDP2O95551 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.72■■■□□ 2.35
TDP2O95551 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TDP2O95551 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TDP2O95551 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TDP2O95551 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TDP2O95551 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
TDP2O95551 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TDP2O95551 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TDP2O95551 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TDP2O95551 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.68■■■□□ 2.34
TDP2O95551 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TDP2O95551 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TDP2O95551 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
TDP2O95551 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.66■■■□□ 2.34
TDP2O95551 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
TDP2O95551 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TDP2O95551 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.64■■■□□ 2.34
TDP2O95551 AC127502.1-201ENST00000399971 1502 ntBASIC29.64■■■□□ 2.34
TDP2O95551 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TDP2O95551 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
TDP2O95551 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.63■■■□□ 2.33
TDP2O95551 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TDP2O95551 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TDP2O95551 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TDP2O95551 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
TDP2O95551 AC021231.2-201ENST00000594613 730 ntBASIC29.61■■■□□ 2.33
TDP2O95551 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TDP2O95551 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.59■■■□□ 2.33
TDP2O95551 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TDP2O95551 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
TDP2O95551 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TDP2O95551 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
TDP2O95551 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
TDP2O95551 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
TDP2O95551 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TDP2O95551 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TDP2O95551 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
TDP2O95551 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TDP2O95551 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.57■■■□□ 2.32
TDP2O95551 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
TDP2O95551 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
TDP2O95551 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TDP2O95551 DUX4L29-201ENST00000425409 679 ntBASIC29.56■■■□□ 2.32
TDP2O95551 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TDP2O95551 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms