Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR3648-1-201ENST00000615959 180 ntBASIC31.52■■■□□ 2.64
NPM3O75607 DUX4L14-201ENST00000621227 1267 ntBASIC31.52■■■□□ 2.64
NPM3O75607 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
NPM3O75607 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.51■■■□□ 2.63
NPM3O75607 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.51■■■□□ 2.63
NPM3O75607 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
NPM3O75607 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NPM3O75607 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
NPM3O75607 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.5■■■□□ 2.63
NPM3O75607 MIR4449-201ENST00000578365 66 ntBASIC31.5■■■□□ 2.63
NPM3O75607 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NPM3O75607 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.49■■■□□ 2.63
NPM3O75607 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.48■■■□□ 2.63
NPM3O75607 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.47■■■□□ 2.63
NPM3O75607 AL161658.1-201ENST00000623641 1967 ntBASIC31.47■■■□□ 2.63
NPM3O75607 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.46■■■□□ 2.63
NPM3O75607 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NPM3O75607 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NPM3O75607 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.45■■■□□ 2.63
NPM3O75607 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.45■■■□□ 2.63
NPM3O75607 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NPM3O75607 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.44■■■□□ 2.62
NPM3O75607 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NPM3O75607 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NPM3O75607 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NPM3O75607 AC016575.1-201ENST00000607026 382 ntBASIC31.42■■■□□ 2.62
NPM3O75607 CR559946.2-201ENST00000623684 991 ntBASIC31.42■■■□□ 2.62
NPM3O75607 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
NPM3O75607 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NPM3O75607 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.41■■■□□ 2.62
NPM3O75607 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NPM3O75607 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
NPM3O75607 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.38■■■□□ 2.61
NPM3O75607 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.38■■■□□ 2.61
NPM3O75607 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NPM3O75607 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NPM3O75607 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.36■■■□□ 2.61
NPM3O75607 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NPM3O75607 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NPM3O75607 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NPM3O75607 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.33■■■□□ 2.61
NPM3O75607 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L13-201ENST00000554103 1267 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L15-201ENST00000611059 1267 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L23-201ENST00000615195 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L24-201ENST00000617576 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L22-201ENST00000618238 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L20-201ENST00000619712 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L21-201ENST00000622058 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L10-201ENST00000622460 1267 ntBASIC31.31■■■□□ 2.6
NPM3O75607 DUX4L25-201ENST00000624915 1269 ntBASIC31.31■■■□□ 2.6
NPM3O75607 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
NPM3O75607 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
NPM3O75607 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NPM3O75607 AC010864.1-201ENST00000609407 1511 ntBASIC31.29■■■□□ 2.6
NPM3O75607 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NPM3O75607 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
NPM3O75607 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NPM3O75607 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.27■■■□□ 2.6
NPM3O75607 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
NPM3O75607 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NPM3O75607 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NPM3O75607 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NPM3O75607 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.25■■■□□ 2.59
NPM3O75607 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
NPM3O75607 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NPM3O75607 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NPM3O75607 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NPM3O75607 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
NPM3O75607 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NPM3O75607 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NPM3O75607 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NPM3O75607 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NPM3O75607 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NPM3O75607 LINC00273-201ENST00000539813 1452 ntBASIC31.21■■■□□ 2.59
NPM3O75607 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NPM3O75607 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.2■■■□□ 2.59
NPM3O75607 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NPM3O75607 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.19■■■□□ 2.58
NPM3O75607 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.19■■■□□ 2.58
NPM3O75607 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NPM3O75607 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.17■■■□□ 2.58
NPM3O75607 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NPM3O75607 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.16■■■□□ 2.58
NPM3O75607 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.16■■■□□ 2.58
NPM3O75607 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.16■■■□□ 2.58
NPM3O75607 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.16■■■□□ 2.58
NPM3O75607 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NPM3O75607 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NPM3O75607 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.15■■■□□ 2.58
NPM3O75607 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.15■■■□□ 2.58
NPM3O75607 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NPM3O75607 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.14■■■□□ 2.58
NPM3O75607 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NPM3O75607 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms