Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
XRCC2O43543 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.77■■□□□ 1.24
XRCC2O43543 AC010864.1-201ENST00000609407 1511 ntBASIC22.77■■□□□ 1.24
XRCC2O43543 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.76■■□□□ 1.23
XRCC2O43543 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
XRCC2O43543 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
XRCC2O43543 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
XRCC2O43543 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
XRCC2O43543 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
XRCC2O43543 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.73■■□□□ 1.23
XRCC2O43543 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
XRCC2O43543 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
XRCC2O43543 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
XRCC2O43543 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRCC2O43543 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
XRCC2O43543 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
XRCC2O43543 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.7■■□□□ 1.22
XRCC2O43543 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
XRCC2O43543 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
XRCC2O43543 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
XRCC2O43543 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRCC2O43543 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
XRCC2O43543 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
XRCC2O43543 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
XRCC2O43543 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.67■■□□□ 1.22
XRCC2O43543 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
XRCC2O43543 MIR762-201ENST00000390236 83 ntBASIC22.66■■□□□ 1.22
XRCC2O43543 SUZ12P1-203ENST00000578195 985 ntBASIC22.66■■□□□ 1.22
XRCC2O43543 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.66■■□□□ 1.22
XRCC2O43543 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
XRCC2O43543 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
XRCC2O43543 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
XRCC2O43543 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.65■■□□□ 1.22
XRCC2O43543 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
XRCC2O43543 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.63■■□□□ 1.21
XRCC2O43543 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRCC2O43543 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRCC2O43543 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
XRCC2O43543 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.62■■□□□ 1.21
XRCC2O43543 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRCC2O43543 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRCC2O43543 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
XRCC2O43543 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
XRCC2O43543 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRCC2O43543 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.61■■□□□ 1.21
XRCC2O43543 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
XRCC2O43543 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.6■■□□□ 1.21
XRCC2O43543 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
XRCC2O43543 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
XRCC2O43543 AC139426.1-201ENST00000568218 2529 ntBASIC22.59■■□□□ 1.21
XRCC2O43543 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.59■■□□□ 1.21
XRCC2O43543 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.59■■□□□ 1.21
XRCC2O43543 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
XRCC2O43543 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
XRCC2O43543 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
XRCC2O43543 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.21
XRCC2O43543 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
XRCC2O43543 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
XRCC2O43543 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
XRCC2O43543 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
XRCC2O43543 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
XRCC2O43543 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
XRCC2O43543 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
XRCC2O43543 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
XRCC2O43543 AC005559.1-201ENST00000589661 871 ntBASIC22.56■■□□□ 1.2
XRCC2O43543 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
XRCC2O43543 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.55■■□□□ 1.2
XRCC2O43543 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
XRCC2O43543 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
XRCC2O43543 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
XRCC2O43543 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
XRCC2O43543 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.54■■□□□ 1.2
XRCC2O43543 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
XRCC2O43543 AL139393.2-201ENST00000608721 2025 ntBASIC22.53■■□□□ 1.2
XRCC2O43543 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
XRCC2O43543 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.53■■□□□ 1.2
XRCC2O43543 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
XRCC2O43543 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRCC2O43543 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
XRCC2O43543 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
XRCC2O43543 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
XRCC2O43543 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
XRCC2O43543 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
XRCC2O43543 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
XRCC2O43543 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.48■■□□□ 1.19
XRCC2O43543 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
XRCC2O43543 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
XRCC2O43543 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
XRCC2O43543 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
XRCC2O43543 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
XRCC2O43543 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.46■■□□□ 1.19
XRCC2O43543 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
XRCC2O43543 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.46■■□□□ 1.19
XRCC2O43543 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms