Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDUFA1O15239 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDUFA1O15239 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.85■□□□□ 0.45
NDUFA1O15239 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NDUFA1O15239 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 AL121749.1-202ENST00000609313 2153 ntBASIC17.84■□□□□ 0.45
NDUFA1O15239 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDUFA1O15239 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NDUFA1O15239 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NDUFA1O15239 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.83■□□□□ 0.44
NDUFA1O15239 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA1O15239 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA1O15239 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDUFA1O15239 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NDUFA1O15239 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA1O15239 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA1O15239 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFA1O15239 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NDUFA1O15239 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NDUFA1O15239 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 DRD5P2-201ENST00000421395 2012 ntBASIC17.78■□□□□ 0.44
NDUFA1O15239 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA1O15239 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA1O15239 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA1O15239 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NDUFA1O15239 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA1O15239 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFA1O15239 AL139393.2-201ENST00000608721 2025 ntBASIC17.75■□□□□ 0.43
NDUFA1O15239 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NDUFA1O15239 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA1O15239 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFA1O15239 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NDUFA1O15239 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFA1O15239 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
NDUFA1O15239 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA1O15239 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA1O15239 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFA1O15239 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NDUFA1O15239 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA1O15239 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA1O15239 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 AC135731.1-201ENST00000569415 2548 ntBASIC17.66■□□□□ 0.42
NDUFA1O15239 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA1O15239 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA1O15239 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA1O15239 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.42
NDUFA1O15239 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFA1O15239 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA1O15239 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms