Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TRAF5O00463 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TRAF5O00463 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRAF5O00463 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.88■■■□□ 2.69
TRAF5O00463 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRAF5O00463 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRAF5O00463 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRAF5O00463 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.87■■■□□ 2.69
TRAF5O00463 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRAF5O00463 GPX1-201ENST00000419349 1106 ntBASIC31.86■■■□□ 2.69
TRAF5O00463 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRAF5O00463 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TRAF5O00463 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.85■■■□□ 2.69
TRAF5O00463 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRAF5O00463 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.83■■■□□ 2.69
TRAF5O00463 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.83■■■□□ 2.69
TRAF5O00463 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.83■■■□□ 2.69
TRAF5O00463 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRAF5O00463 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRAF5O00463 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.81■■■□□ 2.68
TRAF5O00463 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TRAF5O00463 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
TRAF5O00463 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
TRAF5O00463 RNF126P1-201ENST00000567452 1320 ntBASIC31.77■■■□□ 2.68
TRAF5O00463 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
TRAF5O00463 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
TRAF5O00463 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRAF5O00463 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TRAF5O00463 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.75■■■□□ 2.67
TRAF5O00463 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TRAF5O00463 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRAF5O00463 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TRAF5O00463 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRAF5O00463 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRAF5O00463 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.73■■■□□ 2.67
TRAF5O00463 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
TRAF5O00463 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
TRAF5O00463 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.7■■■□□ 2.67
TRAF5O00463 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.69■■■□□ 2.66
TRAF5O00463 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TRAF5O00463 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRAF5O00463 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRAF5O00463 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRAF5O00463 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRAF5O00463 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.66■■■□□ 2.66
TRAF5O00463 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.66■■■□□ 2.66
TRAF5O00463 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRAF5O00463 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.65■■■□□ 2.66
TRAF5O00463 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TRAF5O00463 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TRAF5O00463 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
TRAF5O00463 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.64■■■□□ 2.66
TRAF5O00463 AC012354.3-201ENST00000623734 483 ntBASIC31.64■■■□□ 2.66
TRAF5O00463 NTF6A-201ENST00000591175 560 ntBASIC31.63■■■□□ 2.65
TRAF5O00463 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRAF5O00463 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.63■■■□□ 2.65
TRAF5O00463 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.62■■■□□ 2.65
TRAF5O00463 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.62■■■□□ 2.65
TRAF5O00463 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.62■■■□□ 2.65
TRAF5O00463 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRAF5O00463 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TRAF5O00463 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRAF5O00463 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRAF5O00463 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRAF5O00463 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRAF5O00463 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.59■■■□□ 2.65
TRAF5O00463 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRAF5O00463 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
TRAF5O00463 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.56■■■□□ 2.64
TRAF5O00463 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRAF5O00463 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRAF5O00463 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRAF5O00463 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
TRAF5O00463 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
TRAF5O00463 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
TRAF5O00463 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
TRAF5O00463 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRAF5O00463 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRAF5O00463 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRAF5O00463 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
TRAF5O00463 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.49■■■□□ 2.63
TRAF5O00463 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.49■■■□□ 2.63
TRAF5O00463 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
TRAF5O00463 AL033527.3-201ENST00000566366 1196 ntBASIC31.48■■■□□ 2.63
TRAF5O00463 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRAF5O00463 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRAF5O00463 AC008813.1-201ENST00000536597 885 ntBASIC31.47■■■□□ 2.63
TRAF5O00463 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRAF5O00463 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRAF5O00463 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRAF5O00463 AC022413.1-201ENST00000624602 984 ntBASIC31.46■■■□□ 2.63
TRAF5O00463 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms