Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRCOL1A6NCL2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCOL1A6NCL2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCOL1A6NCL2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.47■□□□□ 0.39
LRCOL1A6NCL2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 ZNRF2P2-203ENST00000454624 420 ntBASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.46■□□□□ 0.39
LRCOL1A6NCL2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 AC021231.2-201ENST00000594613 730 ntBASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.45■□□□□ 0.38
LRCOL1A6NCL2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCOL1A6NCL2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRCOL1A6NCL2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRCOL1A6NCL2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRCOL1A6NCL2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCOL1A6NCL2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCOL1A6NCL2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.42■□□□□ 0.38
LRCOL1A6NCL2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCOL1A6NCL2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCOL1A6NCL2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRCOL1A6NCL2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCOL1A6NCL2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCOL1A6NCL2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCOL1A6NCL2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCOL1A6NCL2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCOL1A6NCL2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCOL1A6NCL2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.39■□□□□ 0.37
LRCOL1A6NCL2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCOL1A6NCL2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCOL1A6NCL2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCOL1A6NCL2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCOL1A6NCL2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRCOL1A6NCL2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCOL1A6NCL2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCOL1A6NCL2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCOL1A6NCL2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRCOL1A6NCL2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCOL1A6NCL2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LRCOL1A6NCL2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCOL1A6NCL2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
LRCOL1A6NCL2 AC010864.1-201ENST00000609407 1511 ntBASIC17.33■□□□□ 0.37
LRCOL1A6NCL2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCOL1A6NCL2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.32■□□□□ 0.36
LRCOL1A6NCL2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCOL1A6NCL2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRCOL1A6NCL2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCOL1A6NCL2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.3■□□□□ 0.36
LRCOL1A6NCL2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCOL1A6NCL2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCOL1A6NCL2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRCOL1A6NCL2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCOL1A6NCL2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCOL1A6NCL2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCOL1A6NCL2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCOL1A6NCL2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCOL1A6NCL2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCOL1A6NCL2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCOL1A6NCL2 LINC01971-201ENST00000617888 1048 ntBASIC17.27■□□□□ 0.36
LRCOL1A6NCL2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRCOL1A6NCL2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LRCOL1A6NCL2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCOL1A6NCL2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCOL1A6NCL2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCOL1A6NCL2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCOL1A6NCL2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCOL1A6NCL2 HLA-V-202ENST00000446817 847 ntBASIC17.25■□□□□ 0.35
LRCOL1A6NCL2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCOL1A6NCL2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRCOL1A6NCL2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCOL1A6NCL2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms