Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.074e-11■■□□□ 14
PRPF8Q6P2Q9 GNB1-202ENST00000434686 684 ntTSL 39.63□□□□□ -0.872e-12■■□□□ 14
PRPF8Q6P2Q9 GNB1-204ENST00000439272 602 ntTSL 58.26□□□□□ -1.092e-12■■□□□ 14
PRPF8Q6P2Q9 PDAP1-203ENST00000488214 274 ntTSL 35.62□□□□□ -1.516e-7■■□□□ 14
PRPF8Q6P2Q9 CTTN-204ENST00000393747 1315 ntTSL 515.48■□□□□ 0.073e-7■■□□□ 14
PRPF8Q6P2Q9 CTTN-215ENST00000533931 567 ntTSL 312.85□□□□□ -0.353e-7■■□□□ 14
PRPF8Q6P2Q9 CTTN-213ENST00000529736 952 ntTSL 312.44□□□□□ -0.423e-7■■□□□ 14
PRPF8Q6P2Q9 ENPP1-203ENST00000486853 732 ntTSL 225.51■■□□□ 1.679e-26■■□□□ 14
PRPF8Q6P2Q9 DDX39A-206ENST00000587730 1813 ntTSL 1 (best)13.48□□□□□ -0.253e-15■■□□□ 14
PRPF8Q6P2Q9 RPS15-204ENST00000586656 436 ntTSL 312.68□□□□□ -0.383e-7■■□□□ 14
PRPF8Q6P2Q9 ABCC2-203ENST00000496621 525 ntTSL 24.92□□□□□ -1.624e-11■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.471e-14■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.511e-14■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.511e-14■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-208ENST00000526909 3844 ntTSL 510.29□□□□□ -0.761e-14■■□□□ 14
PRPF8Q6P2Q9 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.55■□□□□ 0.46e-7■■□□□ 14
PRPF8Q6P2Q9 RHBG-208ENST00000620376 1984 ntTSL 217.21■□□□□ 0.351e-9■■□□□ 14
PRPF8Q6P2Q9 RHBG-201ENST00000451864 1927 ntTSL 217.1■□□□□ 0.331e-9■■□□□ 14
PRPF8Q6P2Q9 MARS-214ENST00000548714 567 ntTSL 216.43■□□□□ 0.226e-7■■□□□ 14
PRPF8Q6P2Q9 MARS-225ENST00000551842 662 ntTSL 216.33■□□□□ 0.26e-7■■□□□ 14
PRPF8Q6P2Q9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.311e-9■■□□□ 14
PRPF8Q6P2Q9 RHBG-205ENST00000612897 1862 ntTSL 1 (best)12.4□□□□□ -0.421e-9■■□□□ 14
PRPF8Q6P2Q9 RHBG-206ENST00000613460 1912 ntTSL 1 (best)11.66□□□□□ -0.541e-9■■□□□ 14
PRPF8Q6P2Q9 RHBG-207ENST00000618120 2424 ntTSL 210.33□□□□□ -0.761e-9■■□□□ 14
PRPF8Q6P2Q9 ZMIZ2-207ENST00000457123 747 ntTSL 526.86■■□□□ 1.896e-9■■□□□ 14
PRPF8Q6P2Q9 ZMIZ2-204ENST00000416856 616 ntTSL 515.05■□□□□ 06e-9■■□□□ 14
PRPF8Q6P2Q9 PLCG1-212ENST00000492148 597 ntTSL 211.62□□□□□ -0.554e-8■■□□□ 14
PRPF8Q6P2Q9 ZMIZ2-213ENST00000492001 680 ntTSL 39.41□□□□□ -0.96e-9■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-210ENST00000489097 4968 ntTSL 216.13■□□□□ 0.174e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.064e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.024e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.024e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.024e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.074e-6■■□□□ 14
PRPF8Q6P2Q9 OTUD7B-201ENST00000417191 1425 ntTSL 1 (best)11.97□□□□□ -0.492e-11■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.734e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.774e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.794e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.84e-6■■□□□ 14
PRPF8Q6P2Q9 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.84e-6■■□□□ 14
PRPF8Q6P2Q9 ARMC5-206ENST00000564514 586 ntTSL 49.02□□□□□ -0.972e-11■■□□□ 14
PRPF8Q6P2Q9 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.012e-11■■□□□ 14
PRPF8Q6P2Q9 OTUD7B-203ENST00000619871 3818 ntTSL 1 (best)5.82□□□□□ -1.482e-11■■□□□ 14
PRPF8Q6P2Q9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.62□□□□□ -0.392e-6■■□□□ 14
PRPF8Q6P2Q9 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC10.07□□□□□ -0.82e-6■■□□□ 14
PRPF8Q6P2Q9 SNORD32A-201ENST00000364805 84 ntBASIC-0.56□□□□□ -2.55e-86■■□□□ 14
PRPF8Q6P2Q9 KDM5B-205ENST00000467487 529 ntTSL 314.88□□□□□ -0.034e-6■■□□□ 14
PRPF8Q6P2Q9 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.634e-6■■□□□ 14
PRPF8Q6P2Q9 ALDH4A1-204ENST00000454547 485 ntTSL 210.28□□□□□ -0.761e-8■■□□□ 14
PRPF8Q6P2Q9 MIR4695-201ENST00000577305 74 ntBASIC9.65□□□□□ -0.871e-8■■□□□ 14
PRPF8Q6P2Q9 KDM5B-206ENST00000470573 535 ntTSL 46.51□□□□□ -1.374e-6■■□□□ 14
PRPF8Q6P2Q9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.681e-7■■□□□ 14
PRPF8Q6P2Q9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.548e-14■■□□□ 14
PRPF8Q6P2Q9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.258e-14■■□□□ 14
PRPF8Q6P2Q9 SPHK1-205ENST00000588682 858 ntTSL 316.29■□□□□ 0.28e-14■■□□□ 14
PRPF8Q6P2Q9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.078e-14■■□□□ 14
PRPF8Q6P2Q9 SPHK1-209ENST00000591762 2502 ntTSL 213.6□□□□□ -0.238e-14■■□□□ 14
PRPF8Q6P2Q9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.111e-10■■□□□ 14
PRPF8Q6P2Q9 PSMD2-213ENST00000476461 816 ntTSL 316.34■□□□□ 0.211e-7■■□□□ 14
PRPF8Q6P2Q9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.73■□□□□ 0.112e-6■■□□□ 14
PRPF8Q6P2Q9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.54□□□□□ -0.082e-6■■□□□ 14
PRPF8Q6P2Q9 DLG3-206ENST00000466140 768 ntTSL 55.53□□□□□ -1.521e-7■■□□□ 14
PRPF8Q6P2Q9 KYNU-208ENST00000613664 662 ntTSL 52.55□□□□□ -22e-6■■□□□ 14
PRPF8Q6P2Q9 KYNU-209ENST00000621320 802 ntTSL 32.32□□□□□ -2.042e-6■■□□□ 14
PRPF8Q6P2Q9 KYNU-207ENST00000612147 671 ntTSL 30.15□□□□□ -2.392e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-209ENST00000436778 802 ntTSL 315.64■□□□□ 0.092e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-212ENST00000444396 784 ntTSL 315.64■□□□□ 0.092e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-214ENST00000457932 552 ntTSL 515.64■□□□□ 0.092e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-207ENST00000420369 780 ntTSL 315.63■□□□□ 0.092e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-219ENST00000476086 588 ntTSL 215.55■□□□□ 0.082e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-228ENST00000525441 610 ntTSL 214.91□□□□□ -0.022e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-208ENST00000436029 911 ntTSL 514.85□□□□□ -0.032e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-226ENST00000495866 569 ntTSL 414.46□□□□□ -0.12e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-205ENST00000412937 574 ntTSL 413.71□□□□□ -0.212e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-206ENST00000419652 555 ntTSL 413.33□□□□□ -0.282e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-210ENST00000437276 440 ntTSL 312.86□□□□□ -0.352e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-213ENST00000449369 825 ntTSL 512.57□□□□□ -0.42e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-232ENST00000530310 542 ntTSL 412.57□□□□□ -0.42e-6■■□□□ 14
PRPF8Q6P2Q9 NR1H3-215ENST00000461778 726 ntTSL 510.34□□□□□ -0.752e-6■■□□□ 14
PRPF8Q6P2Q9 HDAC3-213ENST00000492506 830 ntTSL 211.74□□□□□ -0.533e-16■■□□□ 14
PRPF8Q6P2Q9 CCDC144NL-AS1-211ENST00000579168 638 ntTSL 44.44□□□□□ -1.71e-7■■□□□ 14
PRPF8Q6P2Q9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.771e-7■■□□□ 14
PRPF8Q6P2Q9 GRAMD4-206ENST00000456069 669 ntTSL 38.65□□□□□ -1.022e-7■■□□□ 14
PRPF8Q6P2Q9 CDK5RAP3-206ENST00000578018 567 ntTSL 214.52□□□□□ -0.096e-7■■□□□ 14
PRPF8Q6P2Q9 CDK5RAP3-224ENST00000582275 442 ntTSL 58.03□□□□□ -1.126e-7■■□□□ 14
PRPF8Q6P2Q9 TMEM63B-204ENST00000497371 616 ntTSL 58.71□□□□□ -1.016e-8■■□□□ 14
PRPF8Q6P2Q9 ENGASE-203ENST00000577783 621 ntTSL 214.49□□□□□ -0.091e-7■■□□□ 14
PRPF8Q6P2Q9 CMIP-206ENST00000565029 1559 ntTSL 1 (best)12.27□□□□□ -0.451e-7■■□□□ 14
PRPF8Q6P2Q9 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)9.33□□□□□ -0.922e-10■■□□□ 14
PRPF8Q6P2Q9 UTP15-203ENST00000508686 538 ntTSL 411.6□□□□□ -0.552e-7■■□□□ 14
PRPF8Q6P2Q9 UTP15-205ENST00000510478 586 ntTSL 29.71□□□□□ -0.862e-7■■□□□ 14
PRPF8Q6P2Q9 SLBP-204ENST00000483348 1030 ntTSL 313.73□□□□□ -0.212e-7■■□□□ 14
PRPF8Q6P2Q9 LASP1-202ENST00000419929 762 ntTSL 313.86□□□□□ -0.192e-6■■□□□ 14
PRPF8Q6P2Q9 SEC24C-205ENST00000496827 948 ntTSL 310.19□□□□□ -0.781e-7■■□□□ 14
PRPF8Q6P2Q9 ATN1-204ENST00000541029 855 ntTSL 217.32■□□□□ 0.363e-14■■□□□ 14
PRPF8Q6P2Q9 PPP1CA-210ENST00000542876 588 ntTSL 315.11■□□□□ 0.014e-18■■□□□ 14
PRPF8Q6P2Q9 PPP1CA-211ENST00000546202 554 ntTSL 413.39□□□□□ -0.274e-18■■□□□ 14
PRPF8Q6P2Q9 PPP1CA-206ENST00000529724 572 ntTSL 29.95□□□□□ -0.824e-18■■□□□ 14
PRPF8Q6P2Q9 HM13-207ENST00000464173 587 ntTSL 210.49□□□□□ -0.731e-8■■□□□ 14
PRPF8Q6P2Q9 STARD10-212ENST00000538437 747 ntTSL 215.85■□□□□ 0.136e-8■■□□□ 14
Retrieved 100 of 73,762 protein–RNA pairs in 2027.2 ms