Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.6□□□□□ -0.87
UBE4BO95155 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 CCDC144B-201ENST00000285176 4310 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 HERC2P3-206ENST00000429257 4088 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBE4BO95155 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 RNA5SP74-201ENST00000363538 109 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 CENPW-201ENST00000368325 528 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE4BO95155 MED20-203ENST00000409060 815 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE4BO95155 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.59□□□□□ -0.87
UBE4BO95155 PHBP7-201ENST00000415677 814 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE4BO95155 RBMY2OP-201ENST00000447105 810 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 UGT1A11P-201ENST00000456635 849 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 RPS8P10-201ENST00000460876 622 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 RN7SL541P-201ENST00000464317 283 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 AC026798.1-201ENST00000468490 482 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 AMD1P3-201ENST00000508874 994 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC9.59□□□□□ -0.87
UBE4BO95155 AP003122.1-201ENST00000527402 755 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE4BO95155 RASA4-217ENST00000538869 483 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC9.59□□□□□ -0.87
UBE4BO95155 AC234791.1-201ENST00000620830 1203 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 AC135068.6-201ENST00000625294 622 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 AC008522.1-201ENST00000639479 2906 ntBASIC9.59□□□□□ -0.87
UBE4BO95155 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE4BO95155 AC107959.2-201ENST00000501897 2636 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE4BO95155 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC9.59□□□□□ -0.87
UBE4BO95155 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UBE4BO95155 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE4BO95155 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE4BO95155 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE4BO95155 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
UBE4BO95155 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 VN1R11P-201ENST00000407795 868 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE4BO95155 AC244157.1-201ENST00000415642 163 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE4BO95155 TUBB3P2-201ENST00000480063 232 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 AC068531.1-201ENST00000502398 195 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 RBM48P1-201ENST00000509661 1102 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE4BO95155 AC137800.1-202ENST00000562098 446 ntBASIC9.58□□□□□ -0.88
UBE4BO95155 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC9.58□□□□□ -0.88
UBE4BO95155 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE4BO95155 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE4BO95155 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 LINC02287-201ENST00000555299 1384 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE4BO95155 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.58□□□□□ -0.88
UBE4BO95155 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UBE4BO95155 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC9.58□□□□□ -0.88
UBE4BO95155 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UBE4BO95155 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms