RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
LDB2-202ENST00000441778 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
LDB2-202ENST00000441778 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
LDB2-202ENST00000441778 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
LDB2-202ENST00000441778 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
LDB2-202ENST00000441778 HRCP23327 699 aa15.08■□□□□ 0.01
LDB2-202ENST00000441778 CCDC180Q9P1Z9 1646 aa15□□□□□ -0.01
LDB2-202ENST00000441778 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
LDB2-202ENST00000441778 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
LDB2-202ENST00000441778 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.04
LDB2-202ENST00000441778 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
LDB2-202ENST00000441778 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
LDB2-202ENST00000441778 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
LDB2-202ENST00000441778 TRIM26Q12899 539 aaPredicted RBP14.47□□□□□ -0.09
LDB2-202ENST00000441778 ABCC9O60706 1549 aa14.38□□□□□ -0.11
LDB2-202ENST00000441778 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
LDB2-202ENST00000441778 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
LDB2-202ENST00000441778 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
LDB2-202ENST00000441778 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
LDB2-202ENST00000441778 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
LDB2-202ENST00000441778 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
LDB2-202ENST00000441778 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
LDB2-202ENST00000441778 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
LDB2-202ENST00000441778 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
LDB2-202ENST00000441778 CECR2Q9BXF3 1484 aa13.9□□□□□ -0.18
LDB2-202ENST00000441778 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
LDB2-202ENST00000441778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
LDB2-202ENST00000441778 WIZO95785 1651 aa13.87□□□□□ -0.19
LDB2-202ENST00000441778 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
LDB2-202ENST00000441778 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
LDB2-202ENST00000441778 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
LDB2-202ENST00000441778 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
LDB2-202ENST00000441778 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
LDB2-202ENST00000441778 NACADO15069 1562 aa13.75□□□□□ -0.21
LDB2-202ENST00000441778 DIEXFQ68CQ4 756 aaKnown RBP13.73□□□□□ -0.21
LDB2-202ENST00000441778 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.21
LDB2-202ENST00000441778 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
LDB2-202ENST00000441778 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
LDB2-202ENST00000441778 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
LDB2-202ENST00000441778 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
LDB2-202ENST00000441778 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
LDB2-202ENST00000441778 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
LDB2-202ENST00000441778 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
LDB2-202ENST00000441778 SOGA1O94964 1423 aa13.57□□□□□ -0.24
LDB2-202ENST00000441778 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
LDB2-202ENST00000441778 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
LDB2-202ENST00000441778 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
LDB2-202ENST00000441778 SMARCA4P51532 1647 aa13.52□□□□□ -0.24
LDB2-202ENST00000441778 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
LDB2-202ENST00000441778 EEA1Q15075 1411 aa13.48□□□□□ -0.25
LDB2-202ENST00000441778 MYT1Q01538 1121 aa13.48□□□□□ -0.25
LDB2-202ENST00000441778 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
LDB2-202ENST00000441778 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.26
LDB2-202ENST00000441778 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
LDB2-202ENST00000441778 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
LDB2-202ENST00000441778 MIER1Q8N108 512 aa13.42□□□□□ -0.26
LDB2-202ENST00000441778 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
LDB2-202ENST00000441778 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
LDB2-202ENST00000441778 KIF21BO75037 1637 aa13.35□□□□□ -0.27
LDB2-202ENST00000441778 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
LDB2-202ENST00000441778 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
LDB2-202ENST00000441778 CLIP1P30622 1438 aa13.31□□□□□ -0.28
LDB2-202ENST00000441778 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
LDB2-202ENST00000441778 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
LDB2-202ENST00000441778 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
LDB2-202ENST00000441778 PEG3Q9GZU2 1588 aa13.22□□□□□ -0.29
LDB2-202ENST00000441778 APLP2Q06481 763 aa13.17□□□□□ -0.3
LDB2-202ENST00000441778 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
LDB2-202ENST00000441778 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
LDB2-202ENST00000441778 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
LDB2-202ENST00000441778 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
LDB2-202ENST00000441778 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
LDB2-202ENST00000441778 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
LDB2-202ENST00000441778 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
LDB2-202ENST00000441778 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
LDB2-202ENST00000441778 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
LDB2-202ENST00000441778 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
LDB2-202ENST00000441778 ERICH3Q5RHP9 1530 aa13.06□□□□□ -0.32
LDB2-202ENST00000441778 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
LDB2-202ENST00000441778 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
LDB2-202ENST00000441778 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
LDB2-202ENST00000441778 CUX2O14529 1486 aa13.02□□□□□ -0.33
LDB2-202ENST00000441778 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
LDB2-202ENST00000441778 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
LDB2-202ENST00000441778 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
LDB2-202ENST00000441778 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
LDB2-202ENST00000441778 ARHGAP35Q9NRY4 1499 aa12.92□□□□□ -0.34
LDB2-202ENST00000441778 CUX1P39880 1505 aa12.91□□□□□ -0.34
LDB2-202ENST00000441778 ANP32EQ9BTT0 268 aa12.9□□□□□ -0.34
LDB2-202ENST00000441778 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
LDB2-202ENST00000441778 ITGAEP38570 1179 aa12.88□□□□□ -0.35
LDB2-202ENST00000441778 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
LDB2-202ENST00000441778 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
LDB2-202ENST00000441778 BCANQ96GW7 911 aa12.85□□□□□ -0.35
LDB2-202ENST00000441778 TIAM1Q13009 1591 aa12.84□□□□□ -0.35
LDB2-202ENST00000441778 FKBP8Q14318 412 aa12.81□□□□□ -0.36
LDB2-202ENST00000441778 SETD5Q9C0A6 1442 aa12.8□□□□□ -0.36
LDB2-202ENST00000441778 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
LDB2-202ENST00000441778 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
LDB2-202ENST00000441778 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms