RNA–Protein interactions for RNA: ENST00000509661.1

RBM48P1-201, Transcript of RNA binding motif protein 48 pseudogene 1, humanhuman

BASIC

Gene RBM48P1, Length 1,102 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48P1-201ENST00000509661 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
RBM48P1-201ENST00000509661 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
RBM48P1-201ENST00000509661 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
RBM48P1-201ENST00000509661 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
RBM48P1-201ENST00000509661 FOXD1Q16676 465 aa22.06■■□□□ 1.12
RBM48P1-201ENST00000509661 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
RBM48P1-201ENST00000509661 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
RBM48P1-201ENST00000509661 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
RBM48P1-201ENST00000509661 MSH5O43196 834 aa20.56■□□□□ 0.88
RBM48P1-201ENST00000509661 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
RBM48P1-201ENST00000509661 ADRA2BP18089 450 aa20.51■□□□□ 0.87
RBM48P1-201ENST00000509661 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
RBM48P1-201ENST00000509661 ABCC9O60706 1549 aa19.31■□□□□ 0.68
RBM48P1-201ENST00000509661 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
RBM48P1-201ENST00000509661 MAPK8IP2Q13387 824 aaPredicted RBP18.87■□□□□ 0.61
RBM48P1-201ENST00000509661 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
RBM48P1-201ENST00000509661 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
RBM48P1-201ENST00000509661 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
RBM48P1-201ENST00000509661 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
RBM48P1-201ENST00000509661 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
RBM48P1-201ENST00000509661 NACADO15069 1562 aa18.3■□□□□ 0.52
RBM48P1-201ENST00000509661 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
RBM48P1-201ENST00000509661 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
RBM48P1-201ENST00000509661 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
RBM48P1-201ENST00000509661 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
RBM48P1-201ENST00000509661 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
RBM48P1-201ENST00000509661 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
RBM48P1-201ENST00000509661 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
RBM48P1-201ENST00000509661 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
RBM48P1-201ENST00000509661 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
RBM48P1-201ENST00000509661 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
RBM48P1-201ENST00000509661 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
RBM48P1-201ENST00000509661 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
RBM48P1-201ENST00000509661 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
RBM48P1-201ENST00000509661 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
RBM48P1-201ENST00000509661 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
RBM48P1-201ENST00000509661 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
RBM48P1-201ENST00000509661 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
RBM48P1-201ENST00000509661 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
RBM48P1-201ENST00000509661 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
RBM48P1-201ENST00000509661 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
RBM48P1-201ENST00000509661 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
RBM48P1-201ENST00000509661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
RBM48P1-201ENST00000509661 KCNA4P22459 653 aa17.05■□□□□ 0.32
RBM48P1-201ENST00000509661 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
RBM48P1-201ENST00000509661 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
RBM48P1-201ENST00000509661 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
RBM48P1-201ENST00000509661 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
RBM48P1-201ENST00000509661 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
RBM48P1-201ENST00000509661 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
RBM48P1-201ENST00000509661 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
RBM48P1-201ENST00000509661 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
RBM48P1-201ENST00000509661 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
RBM48P1-201ENST00000509661 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
RBM48P1-201ENST00000509661 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
RBM48P1-201ENST00000509661 CUX2O14529 1486 aa16.62■□□□□ 0.25
RBM48P1-201ENST00000509661 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
RBM48P1-201ENST00000509661 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
RBM48P1-201ENST00000509661 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
RBM48P1-201ENST00000509661 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
RBM48P1-201ENST00000509661 NESP48681 1621 aa16.53■□□□□ 0.24
RBM48P1-201ENST00000509661 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
RBM48P1-201ENST00000509661 DSG3P32926 999 aa16.48■□□□□ 0.23
RBM48P1-201ENST00000509661 CAPN15O75808 1086 aa16.47■□□□□ 0.23
RBM48P1-201ENST00000509661 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
RBM48P1-201ENST00000509661 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
RBM48P1-201ENST00000509661 WIZO95785 1651 aa16.33■□□□□ 0.2
RBM48P1-201ENST00000509661 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
RBM48P1-201ENST00000509661 CFTRP13569 1480 aa16.25■□□□□ 0.19
RBM48P1-201ENST00000509661 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
RBM48P1-201ENST00000509661 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
RBM48P1-201ENST00000509661 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
RBM48P1-201ENST00000509661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
RBM48P1-201ENST00000509661 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
RBM48P1-201ENST00000509661 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
RBM48P1-201ENST00000509661 APLP2Q06481 763 aa16.19■□□□□ 0.18
RBM48P1-201ENST00000509661 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
RBM48P1-201ENST00000509661 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
RBM48P1-201ENST00000509661 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
RBM48P1-201ENST00000509661 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
RBM48P1-201ENST00000509661 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
RBM48P1-201ENST00000509661 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
RBM48P1-201ENST00000509661 ABCB7O75027 752 aa16.12■□□□□ 0.17
RBM48P1-201ENST00000509661 WDR62O43379 1518 aa16.11■□□□□ 0.17
RBM48P1-201ENST00000509661 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
RBM48P1-201ENST00000509661 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
RBM48P1-201ENST00000509661 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
RBM48P1-201ENST00000509661 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
RBM48P1-201ENST00000509661 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
RBM48P1-201ENST00000509661 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
RBM48P1-201ENST00000509661 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
RBM48P1-201ENST00000509661 FBLN2P98095 1184 aa15.93■□□□□ 0.14
RBM48P1-201ENST00000509661 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
RBM48P1-201ENST00000509661 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
RBM48P1-201ENST00000509661 SOGA1O94964 1423 aa15.84■□□□□ 0.13
RBM48P1-201ENST00000509661 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
RBM48P1-201ENST00000509661 ZNF608Q9ULD9 1512 aaPredicted RBP15.81■□□□□ 0.12
RBM48P1-201ENST00000509661 POTEHQ6S545 545 aa15.8■□□□□ 0.12
RBM48P1-201ENST00000509661 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
RBM48P1-201ENST00000509661 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms