RNA–Protein interactions for RNA: ENST00000399033.8

SLC24A1-203, Transcript of solute carrier family 24 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC24A1, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A1-203ENST00000399033 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
SLC24A1-203ENST00000399033 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
SLC24A1-203ENST00000399033 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
SLC24A1-203ENST00000399033 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
SLC24A1-203ENST00000399033 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
SLC24A1-203ENST00000399033 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
SLC24A1-203ENST00000399033 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
SLC24A1-203ENST00000399033 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
SLC24A1-203ENST00000399033 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.01
SLC24A1-203ENST00000399033 SCRIBQ14160 1630 aa14.62□□□□□ -0.07
SLC24A1-203ENST00000399033 ABCC9O60706 1549 aa14.62□□□□□ -0.07
SLC24A1-203ENST00000399033 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
SLC24A1-203ENST00000399033 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
SLC24A1-203ENST00000399033 HRCP23327 699 aa14.56□□□□□ -0.08
SLC24A1-203ENST00000399033 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
SLC24A1-203ENST00000399033 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
SLC24A1-203ENST00000399033 NACADO15069 1562 aa14.35□□□□□ -0.11
SLC24A1-203ENST00000399033 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
SLC24A1-203ENST00000399033 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
SLC24A1-203ENST00000399033 PPARGC1BQ86YN6 1023 aaKnown RBP14.33□□□□□ -0.12
SLC24A1-203ENST00000399033 FAM9AQ8IZU1 332 aaPredicted RBP14.29□□□□□ -0.12
SLC24A1-203ENST00000399033 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
SLC24A1-203ENST00000399033 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
SLC24A1-203ENST00000399033 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
SLC24A1-203ENST00000399033 WIZO95785 1651 aa14.19□□□□□ -0.14
SLC24A1-203ENST00000399033 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
SLC24A1-203ENST00000399033 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
SLC24A1-203ENST00000399033 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
SLC24A1-203ENST00000399033 SMARCA4P51532 1647 aa13.94□□□□□ -0.18
SLC24A1-203ENST00000399033 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
SLC24A1-203ENST00000399033 UNC13AQ9UPW8 1703 aa13.91□□□□□ -0.18
SLC24A1-203ENST00000399033 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
SLC24A1-203ENST00000399033 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
SLC24A1-203ENST00000399033 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
SLC24A1-203ENST00000399033 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
SLC24A1-203ENST00000399033 SOGA1O94964 1423 aa13.8□□□□□ -0.2
SLC24A1-203ENST00000399033 BICRAQ9NZM4 1560 aa13.77□□□□□ -0.2
SLC24A1-203ENST00000399033 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
SLC24A1-203ENST00000399033 TTBK1Q5TCY1 1321 aaPredicted RBP13.74□□□□□ -0.21
SLC24A1-203ENST00000399033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
SLC24A1-203ENST00000399033 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
SLC24A1-203ENST00000399033 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
SLC24A1-203ENST00000399033 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
SLC24A1-203ENST00000399033 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
SLC24A1-203ENST00000399033 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
SLC24A1-203ENST00000399033 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
SLC24A1-203ENST00000399033 EEA1Q15075 1411 aa13.65□□□□□ -0.22
SLC24A1-203ENST00000399033 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
SLC24A1-203ENST00000399033 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
SLC24A1-203ENST00000399033 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
SLC24A1-203ENST00000399033 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
SLC24A1-203ENST00000399033 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
SLC24A1-203ENST00000399033 CEP164Q9UPV0 1460 aa13.5□□□□□ -0.25
SLC24A1-203ENST00000399033 KIF21BO75037 1637 aa13.46□□□□□ -0.25
SLC24A1-203ENST00000399033 CLIP1P30622 1438 aa13.46□□□□□ -0.25
SLC24A1-203ENST00000399033 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.26
SLC24A1-203ENST00000399033 RANGAP1P46060 587 aaPredicted RBP13.45□□□□□ -0.26
SLC24A1-203ENST00000399033 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
SLC24A1-203ENST00000399033 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
SLC24A1-203ENST00000399033 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
SLC24A1-203ENST00000399033 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
SLC24A1-203ENST00000399033 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
SLC24A1-203ENST00000399033 APLP2Q06481 763 aa13.34□□□□□ -0.27
SLC24A1-203ENST00000399033 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
SLC24A1-203ENST00000399033 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
SLC24A1-203ENST00000399033 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
SLC24A1-203ENST00000399033 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
SLC24A1-203ENST00000399033 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
SLC24A1-203ENST00000399033 CUX1P39880 1505 aa13.28□□□□□ -0.28
SLC24A1-203ENST00000399033 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
SLC24A1-203ENST00000399033 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
SLC24A1-203ENST00000399033 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
SLC24A1-203ENST00000399033 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
SLC24A1-203ENST00000399033 CFTRP13569 1480 aa13.22□□□□□ -0.29
SLC24A1-203ENST00000399033 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
SLC24A1-203ENST00000399033 KIF27Q86VH2 1401 aa13.21□□□□□ -0.29
SLC24A1-203ENST00000399033 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
SLC24A1-203ENST00000399033 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
SLC24A1-203ENST00000399033 MIER1Q8N108 512 aa13.14□□□□□ -0.31
SLC24A1-203ENST00000399033 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
SLC24A1-203ENST00000399033 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
SLC24A1-203ENST00000399033 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
SLC24A1-203ENST00000399033 CUX2O14529 1486 aa13.11□□□□□ -0.31
SLC24A1-203ENST00000399033 IGF1RP08069 1367 aa13.1□□□□□ -0.31
SLC24A1-203ENST00000399033 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
SLC24A1-203ENST00000399033 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
SLC24A1-203ENST00000399033 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
SLC24A1-203ENST00000399033 ITGAEP38570 1179 aa13.05□□□□□ -0.32
SLC24A1-203ENST00000399033 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
SLC24A1-203ENST00000399033 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
SLC24A1-203ENST00000399033 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
SLC24A1-203ENST00000399033 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
SLC24A1-203ENST00000399033 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
SLC24A1-203ENST00000399033 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
SLC24A1-203ENST00000399033 CC2D2AQ9P2K1 1620 aa12.97□□□□□ -0.33
SLC24A1-203ENST00000399033 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
SLC24A1-203ENST00000399033 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
SLC24A1-203ENST00000399033 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
SLC24A1-203ENST00000399033 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
SLC24A1-203ENST00000399033 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms