RNA–Protein interactions for RNA: ENST00000555299.1

LINC02287-201, Transcript of long intergenic non-protein coding RNA 2287, humanhuman

TSL 1 (best) BASIC

Gene LINC02287, Length 1,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02287-201ENST00000555299 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
LINC02287-201ENST00000555299 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
LINC02287-201ENST00000555299 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
LINC02287-201ENST00000555299 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
LINC02287-201ENST00000555299 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
LINC02287-201ENST00000555299 FOXD1Q16676 465 aa21.98■■□□□ 1.11
LINC02287-201ENST00000555299 ABCC9O60706 1549 aa21.31■■□□□ 1
LINC02287-201ENST00000555299 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.93
LINC02287-201ENST00000555299 MSH5O43196 834 aa20.82■□□□□ 0.92
LINC02287-201ENST00000555299 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
LINC02287-201ENST00000555299 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
LINC02287-201ENST00000555299 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
LINC02287-201ENST00000555299 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
LINC02287-201ENST00000555299 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
LINC02287-201ENST00000555299 ADRA2BP18089 450 aa20.15■□□□□ 0.82
LINC02287-201ENST00000555299 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
LINC02287-201ENST00000555299 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
LINC02287-201ENST00000555299 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
LINC02287-201ENST00000555299 NACADO15069 1562 aa19.87■□□□□ 0.77
LINC02287-201ENST00000555299 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
LINC02287-201ENST00000555299 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
LINC02287-201ENST00000555299 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
LINC02287-201ENST00000555299 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
LINC02287-201ENST00000555299 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
LINC02287-201ENST00000555299 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
LINC02287-201ENST00000555299 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
LINC02287-201ENST00000555299 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
LINC02287-201ENST00000555299 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
LINC02287-201ENST00000555299 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
LINC02287-201ENST00000555299 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
LINC02287-201ENST00000555299 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
LINC02287-201ENST00000555299 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
LINC02287-201ENST00000555299 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.57
LINC02287-201ENST00000555299 CUX2O14529 1486 aa18.44■□□□□ 0.54
LINC02287-201ENST00000555299 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
LINC02287-201ENST00000555299 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
LINC02287-201ENST00000555299 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
LINC02287-201ENST00000555299 NESP48681 1621 aa18.21■□□□□ 0.51
LINC02287-201ENST00000555299 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
LINC02287-201ENST00000555299 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
LINC02287-201ENST00000555299 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
LINC02287-201ENST00000555299 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
LINC02287-201ENST00000555299 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
LINC02287-201ENST00000555299 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
LINC02287-201ENST00000555299 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
LINC02287-201ENST00000555299 LAMC3Q9Y6N6 1575 aa17.98■□□□□ 0.47
LINC02287-201ENST00000555299 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
LINC02287-201ENST00000555299 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
LINC02287-201ENST00000555299 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
LINC02287-201ENST00000555299 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
LINC02287-201ENST00000555299 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
LINC02287-201ENST00000555299 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
LINC02287-201ENST00000555299 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
LINC02287-201ENST00000555299 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
LINC02287-201ENST00000555299 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
LINC02287-201ENST00000555299 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
LINC02287-201ENST00000555299 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
LINC02287-201ENST00000555299 WDR62O43379 1518 aa17.71■□□□□ 0.43
LINC02287-201ENST00000555299 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
LINC02287-201ENST00000555299 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
LINC02287-201ENST00000555299 WIZO95785 1651 aa17.66■□□□□ 0.42
LINC02287-201ENST00000555299 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
LINC02287-201ENST00000555299 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
LINC02287-201ENST00000555299 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
LINC02287-201ENST00000555299 CFTRP13569 1480 aa17.53■□□□□ 0.4
LINC02287-201ENST00000555299 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
LINC02287-201ENST00000555299 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
LINC02287-201ENST00000555299 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
LINC02287-201ENST00000555299 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
LINC02287-201ENST00000555299 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
LINC02287-201ENST00000555299 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
LINC02287-201ENST00000555299 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
LINC02287-201ENST00000555299 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.36
LINC02287-201ENST00000555299 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
LINC02287-201ENST00000555299 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
LINC02287-201ENST00000555299 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
LINC02287-201ENST00000555299 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
LINC02287-201ENST00000555299 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
LINC02287-201ENST00000555299 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
LINC02287-201ENST00000555299 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
LINC02287-201ENST00000555299 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
LINC02287-201ENST00000555299 FBLN2P98095 1184 aa17.21■□□□□ 0.35
LINC02287-201ENST00000555299 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
LINC02287-201ENST00000555299 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC02287-201ENST00000555299 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
LINC02287-201ENST00000555299 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
LINC02287-201ENST00000555299 CHD1O14646 1710 aa17.09■□□□□ 0.33
LINC02287-201ENST00000555299 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
LINC02287-201ENST00000555299 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
LINC02287-201ENST00000555299 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
LINC02287-201ENST00000555299 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
LINC02287-201ENST00000555299 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
LINC02287-201ENST00000555299 SOGA1O94964 1423 aa17.02■□□□□ 0.31
LINC02287-201ENST00000555299 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
LINC02287-201ENST00000555299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.31
LINC02287-201ENST00000555299 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
LINC02287-201ENST00000555299 FGD5Q6ZNL6 1462 aa16.9■□□□□ 0.3
LINC02287-201ENST00000555299 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
LINC02287-201ENST00000555299 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
LINC02287-201ENST00000555299 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms