RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
EXOSC9-211ENST00000512454 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.57
EXOSC9-211ENST00000512454 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
EXOSC9-211ENST00000512454 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
EXOSC9-211ENST00000512454 FOXD1Q16676 465 aa20.88■□□□□ 0.93
EXOSC9-211ENST00000512454 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
EXOSC9-211ENST00000512454 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
EXOSC9-211ENST00000512454 MSH5O43196 834 aa19.53■□□□□ 0.72
EXOSC9-211ENST00000512454 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
EXOSC9-211ENST00000512454 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
EXOSC9-211ENST00000512454 ADRA2BP18089 450 aa19.44■□□□□ 0.7
EXOSC9-211ENST00000512454 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
EXOSC9-211ENST00000512454 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
EXOSC9-211ENST00000512454 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
EXOSC9-211ENST00000512454 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
EXOSC9-211ENST00000512454 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
EXOSC9-211ENST00000512454 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
EXOSC9-211ENST00000512454 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
EXOSC9-211ENST00000512454 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
EXOSC9-211ENST00000512454 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
EXOSC9-211ENST00000512454 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.3
EXOSC9-211ENST00000512454 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
EXOSC9-211ENST00000512454 ABCC9O60706 1549 aa16.87■□□□□ 0.29
EXOSC9-211ENST00000512454 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
EXOSC9-211ENST00000512454 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
EXOSC9-211ENST00000512454 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
EXOSC9-211ENST00000512454 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
EXOSC9-211ENST00000512454 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
EXOSC9-211ENST00000512454 NACADO15069 1562 aa16.6■□□□□ 0.25
EXOSC9-211ENST00000512454 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
EXOSC9-211ENST00000512454 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
EXOSC9-211ENST00000512454 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
EXOSC9-211ENST00000512454 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
EXOSC9-211ENST00000512454 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
EXOSC9-211ENST00000512454 SCRIBQ14160 1630 aa16.27■□□□□ 0.19
EXOSC9-211ENST00000512454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.195e-7■■■□□ 14.7
EXOSC9-211ENST00000512454 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
EXOSC9-211ENST00000512454 SHROOM4Q9ULL8 1493 aa16.21■□□□□ 0.19
EXOSC9-211ENST00000512454 KCNA4P22459 653 aa16.14■□□□□ 0.18
EXOSC9-211ENST00000512454 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
EXOSC9-211ENST00000512454 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
EXOSC9-211ENST00000512454 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
EXOSC9-211ENST00000512454 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
EXOSC9-211ENST00000512454 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
EXOSC9-211ENST00000512454 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
EXOSC9-211ENST00000512454 CAPN15O75808 1086 aa15.66■□□□□ 0.1
EXOSC9-211ENST00000512454 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
EXOSC9-211ENST00000512454 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
EXOSC9-211ENST00000512454 DSG3P32926 999 aa15.62■□□□□ 0.09
EXOSC9-211ENST00000512454 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
EXOSC9-211ENST00000512454 RSF1Q96T23 1441 aaPredicted RBP15.55■□□□□ 0.08
EXOSC9-211ENST00000512454 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
EXOSC9-211ENST00000512454 WIZO95785 1651 aa15.48■□□□□ 0.07
EXOSC9-211ENST00000512454 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
EXOSC9-211ENST00000512454 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
EXOSC9-211ENST00000512454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
EXOSC9-211ENST00000512454 APLP2Q06481 763 aa15.45■□□□□ 0.06
EXOSC9-211ENST00000512454 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
EXOSC9-211ENST00000512454 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
EXOSC9-211ENST00000512454 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
EXOSC9-211ENST00000512454 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
EXOSC9-211ENST00000512454 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
EXOSC9-211ENST00000512454 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
EXOSC9-211ENST00000512454 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
EXOSC9-211ENST00000512454 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
EXOSC9-211ENST00000512454 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
EXOSC9-211ENST00000512454 ABCB7O75027 752 aa15.29■□□□□ 0.04
EXOSC9-211ENST00000512454 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
EXOSC9-211ENST00000512454 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
EXOSC9-211ENST00000512454 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
EXOSC9-211ENST00000512454 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
EXOSC9-211ENST00000512454 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
EXOSC9-211ENST00000512454 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
EXOSC9-211ENST00000512454 POLA2Q14181 598 aa15.02□□□□□ -0.01
EXOSC9-211ENST00000512454 POTEHQ6S545 545 aa14.98□□□□□ -0.01
EXOSC9-211ENST00000512454 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
EXOSC9-211ENST00000512454 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
EXOSC9-211ENST00000512454 CFTRP13569 1480 aa14.87□□□□□ -0.03
EXOSC9-211ENST00000512454 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
EXOSC9-211ENST00000512454 ZBTB22O15209 634 aa14.86□□□□□ -0.03
EXOSC9-211ENST00000512454 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
EXOSC9-211ENST00000512454 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
EXOSC9-211ENST00000512454 NESP48681 1621 aa14.76□□□□□ -0.05
EXOSC9-211ENST00000512454 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
EXOSC9-211ENST00000512454 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
EXOSC9-211ENST00000512454 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
EXOSC9-211ENST00000512454 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
EXOSC9-211ENST00000512454 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
EXOSC9-211ENST00000512454 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
EXOSC9-211ENST00000512454 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
EXOSC9-211ENST00000512454 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
EXOSC9-211ENST00000512454 TOP2BQ02880 1626 aa14.64□□□□□ -0.07
EXOSC9-211ENST00000512454 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
EXOSC9-211ENST00000512454 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
EXOSC9-211ENST00000512454 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
EXOSC9-211ENST00000512454 CUX1P39880 1505 aa14.6□□□□□ -0.07
EXOSC9-211ENST00000512454 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
EXOSC9-211ENST00000512454 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
EXOSC9-211ENST00000512454 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
EXOSC9-211ENST00000512454 ERCC6Q03468 1493 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms