RNA–Protein interactions for RNA: ENST00000420218.3

PTK2B-205, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 5 BASIC

Gene PTK2B, Length 3,941 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-205ENST00000420218 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
PTK2B-205ENST00000420218 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
PTK2B-205ENST00000420218 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
PTK2B-205ENST00000420218 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
PTK2B-205ENST00000420218 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
PTK2B-205ENST00000420218 HRCP23327 699 aa14.93□□□□□ -0.02
PTK2B-205ENST00000420218 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
PTK2B-205ENST00000420218 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
PTK2B-205ENST00000420218 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
PTK2B-205ENST00000420218 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
PTK2B-205ENST00000420218 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
PTK2B-205ENST00000420218 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
PTK2B-205ENST00000420218 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
PTK2B-205ENST00000420218 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
PTK2B-205ENST00000420218 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
PTK2B-205ENST00000420218 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
PTK2B-205ENST00000420218 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
PTK2B-205ENST00000420218 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
PTK2B-205ENST00000420218 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
PTK2B-205ENST00000420218 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
PTK2B-205ENST00000420218 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
PTK2B-205ENST00000420218 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
PTK2B-205ENST00000420218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
PTK2B-205ENST00000420218 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
PTK2B-205ENST00000420218 ABCC9O60706 1549 aa14.04□□□□□ -0.16
PTK2B-205ENST00000420218 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
PTK2B-205ENST00000420218 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
PTK2B-205ENST00000420218 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
PTK2B-205ENST00000420218 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
PTK2B-205ENST00000420218 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
PTK2B-205ENST00000420218 MYT1Q01538 1121 aa13.88□□□□□ -0.19
PTK2B-205ENST00000420218 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
PTK2B-205ENST00000420218 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
PTK2B-205ENST00000420218 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
PTK2B-205ENST00000420218 APLP2Q06481 763 aa13.76□□□□□ -0.21
PTK2B-205ENST00000420218 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
PTK2B-205ENST00000420218 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTK2B-205ENST00000420218 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
PTK2B-205ENST00000420218 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
PTK2B-205ENST00000420218 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
PTK2B-205ENST00000420218 BCANQ96GW7 911 aa13.48□□□□□ -0.25
PTK2B-205ENST00000420218 ITGAEP38570 1179 aa13.47□□□□□ -0.25
PTK2B-205ENST00000420218 MIER1Q8N108 512 aa13.46□□□□□ -0.25
PTK2B-205ENST00000420218 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
PTK2B-205ENST00000420218 NACADO15069 1562 aa13.43□□□□□ -0.26
PTK2B-205ENST00000420218 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
PTK2B-205ENST00000420218 NEFLP07196 543 aa13.39□□□□□ -0.27
PTK2B-205ENST00000420218 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
PTK2B-205ENST00000420218 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
PTK2B-205ENST00000420218 WIZO95785 1651 aa13.29□□□□□ -0.28
PTK2B-205ENST00000420218 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
PTK2B-205ENST00000420218 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
PTK2B-205ENST00000420218 FKBP8Q14318 412 aa13.17□□□□□ -0.3
PTK2B-205ENST00000420218 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
PTK2B-205ENST00000420218 ABCC8Q09428 1581 aa13.15□□□□□ -0.31
PTK2B-205ENST00000420218 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
PTK2B-205ENST00000420218 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
PTK2B-205ENST00000420218 SOGA1O94964 1423 aa13.08□□□□□ -0.32
PTK2B-205ENST00000420218 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
PTK2B-205ENST00000420218 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
PTK2B-205ENST00000420218 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
PTK2B-205ENST00000420218 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
PTK2B-205ENST00000420218 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
PTK2B-205ENST00000420218 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
PTK2B-205ENST00000420218 SMARCA4P51532 1647 aa13□□□□□ -0.33
PTK2B-205ENST00000420218 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PTK2B-205ENST00000420218 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
PTK2B-205ENST00000420218 ANP32CO43423 234 aa12.98□□□□□ -0.33
PTK2B-205ENST00000420218 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
PTK2B-205ENST00000420218 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
PTK2B-205ENST00000420218 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
PTK2B-205ENST00000420218 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
PTK2B-205ENST00000420218 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
PTK2B-205ENST00000420218 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
PTK2B-205ENST00000420218 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
PTK2B-205ENST00000420218 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
PTK2B-205ENST00000420218 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
PTK2B-205ENST00000420218 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
PTK2B-205ENST00000420218 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
PTK2B-205ENST00000420218 CLIP1P30622 1438 aa12.87□□□□□ -0.35
PTK2B-205ENST00000420218 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTK2B-205ENST00000420218 P3H3Q8IVL6 736 aa12.87□□□□□ -0.35
PTK2B-205ENST00000420218 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
PTK2B-205ENST00000420218 EEA1Q15075 1411 aa12.83□□□□□ -0.36
PTK2B-205ENST00000420218 NBR1Q14596 966 aa12.82□□□□□ -0.36
PTK2B-205ENST00000420218 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
PTK2B-205ENST00000420218 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
PTK2B-205ENST00000420218 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
PTK2B-205ENST00000420218 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
PTK2B-205ENST00000420218 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
PTK2B-205ENST00000420218 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
PTK2B-205ENST00000420218 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
PTK2B-205ENST00000420218 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
PTK2B-205ENST00000420218 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
PTK2B-205ENST00000420218 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
PTK2B-205ENST00000420218 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
PTK2B-205ENST00000420218 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.37
PTK2B-205ENST00000420218 ZNF326Q5BKZ1 582 aaKnown RBP12.68□□□□□ -0.38
PTK2B-205ENST00000420218 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
PTK2B-205ENST00000420218 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms