RNA–Protein interactions for RNA: ENST00000592504.5

ZNF559-211, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-211ENST00000592504 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
ZNF559-211ENST00000592504 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
ZNF559-211ENST00000592504 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
ZNF559-211ENST00000592504 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
ZNF559-211ENST00000592504 FOXD1Q16676 465 aa20.21■□□□□ 0.83
ZNF559-211ENST00000592504 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
ZNF559-211ENST00000592504 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
ZNF559-211ENST00000592504 MSH5O43196 834 aa19.19■□□□□ 0.66
ZNF559-211ENST00000592504 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
ZNF559-211ENST00000592504 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
ZNF559-211ENST00000592504 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
ZNF559-211ENST00000592504 ADRA2BP18089 450 aa18.5■□□□□ 0.55
ZNF559-211ENST00000592504 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
ZNF559-211ENST00000592504 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
ZNF559-211ENST00000592504 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
ZNF559-211ENST00000592504 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
ZNF559-211ENST00000592504 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.27
ZNF559-211ENST00000592504 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
ZNF559-211ENST00000592504 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
ZNF559-211ENST00000592504 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
ZNF559-211ENST00000592504 ABCC9O60706 1549 aa16.34■□□□□ 0.21
ZNF559-211ENST00000592504 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
ZNF559-211ENST00000592504 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
ZNF559-211ENST00000592504 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
ZNF559-211ENST00000592504 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
ZNF559-211ENST00000592504 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
ZNF559-211ENST00000592504 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
ZNF559-211ENST00000592504 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
ZNF559-211ENST00000592504 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
ZNF559-211ENST00000592504 C1QBPQ07021 282 aaKnown RBP16.06■□□□□ 0.16
ZNF559-211ENST00000592504 NACADO15069 1562 aa16.03■□□□□ 0.16
ZNF559-211ENST00000592504 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
ZNF559-211ENST00000592504 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
ZNF559-211ENST00000592504 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
ZNF559-211ENST00000592504 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
ZNF559-211ENST00000592504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
ZNF559-211ENST00000592504 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
ZNF559-211ENST00000592504 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
ZNF559-211ENST00000592504 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
ZNF559-211ENST00000592504 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
ZNF559-211ENST00000592504 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
ZNF559-211ENST00000592504 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
ZNF559-211ENST00000592504 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
ZNF559-211ENST00000592504 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
ZNF559-211ENST00000592504 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
ZNF559-211ENST00000592504 CAPN15O75808 1086 aa15.17■□□□□ 0.02
ZNF559-211ENST00000592504 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
ZNF559-211ENST00000592504 POTEHQ6S545 545 aa15.14■□□□□ 0.01
ZNF559-211ENST00000592504 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
ZNF559-211ENST00000592504 WIZO95785 1651 aa15.1■□□□□ 0.01
ZNF559-211ENST00000592504 DSG3P32926 999 aa15.09■□□□□ 0.01
ZNF559-211ENST00000592504 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
ZNF559-211ENST00000592504 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
ZNF559-211ENST00000592504 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
ZNF559-211ENST00000592504 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
ZNF559-211ENST00000592504 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
ZNF559-211ENST00000592504 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
ZNF559-211ENST00000592504 APLP2Q06481 763 aa14.87□□□□□ -0.03
ZNF559-211ENST00000592504 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
ZNF559-211ENST00000592504 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
ZNF559-211ENST00000592504 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
ZNF559-211ENST00000592504 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
ZNF559-211ENST00000592504 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
ZNF559-211ENST00000592504 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.04
ZNF559-211ENST00000592504 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
ZNF559-211ENST00000592504 ABCB7O75027 752 aa14.73□□□□□ -0.05
ZNF559-211ENST00000592504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
ZNF559-211ENST00000592504 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
ZNF559-211ENST00000592504 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
ZNF559-211ENST00000592504 KCNA4P22459 653 aa14.62□□□□□ -0.07
ZNF559-211ENST00000592504 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
ZNF559-211ENST00000592504 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
ZNF559-211ENST00000592504 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.08
ZNF559-211ENST00000592504 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
ZNF559-211ENST00000592504 CFTRP13569 1480 aa14.44□□□□□ -0.1
ZNF559-211ENST00000592504 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
ZNF559-211ENST00000592504 PRDM2Q13029 1718 aa14.41□□□□□ -0.1
ZNF559-211ENST00000592504 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
ZNF559-211ENST00000592504 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
ZNF559-211ENST00000592504 NESP48681 1621 aa14.31□□□□□ -0.12
ZNF559-211ENST00000592504 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
ZNF559-211ENST00000592504 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
ZNF559-211ENST00000592504 FAM9AQ8IZU1 332 aaPredicted RBP14.3□□□□□ -0.12
ZNF559-211ENST00000592504 POLA2Q14181 598 aa14.29□□□□□ -0.12
ZNF559-211ENST00000592504 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.13
ZNF559-211ENST00000592504 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
ZNF559-211ENST00000592504 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
ZNF559-211ENST00000592504 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
ZNF559-211ENST00000592504 CUX1P39880 1505 aa14.23□□□□□ -0.13
ZNF559-211ENST00000592504 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
ZNF559-211ENST00000592504 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
ZNF559-211ENST00000592504 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
ZNF559-211ENST00000592504 SOGA1O94964 1423 aa14.17□□□□□ -0.14
ZNF559-211ENST00000592504 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
ZNF559-211ENST00000592504 EEA1Q15075 1411 aa14.15□□□□□ -0.14
ZNF559-211ENST00000592504 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
ZNF559-211ENST00000592504 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
ZNF559-211ENST00000592504 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
ZNF559-211ENST00000592504 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
ZNF559-211ENST00000592504 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms