RNA–Protein interactions for RNA: ENST00000438684.1

MSL3P1-201, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene MSL3P1, Length 2,032 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-201ENST00000438684 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
MSL3P1-201ENST00000438684 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
MSL3P1-201ENST00000438684 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
MSL3P1-201ENST00000438684 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
MSL3P1-201ENST00000438684 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
MSL3P1-201ENST00000438684 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
MSL3P1-201ENST00000438684 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
MSL3P1-201ENST00000438684 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
MSL3P1-201ENST00000438684 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
MSL3P1-201ENST00000438684 HRCP23327 699 aa14.5□□□□□ -0.09
MSL3P1-201ENST00000438684 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
MSL3P1-201ENST00000438684 ABCC9O60706 1549 aa14.28□□□□□ -0.12
MSL3P1-201ENST00000438684 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
MSL3P1-201ENST00000438684 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
MSL3P1-201ENST00000438684 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
MSL3P1-201ENST00000438684 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
MSL3P1-201ENST00000438684 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
MSL3P1-201ENST00000438684 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
MSL3P1-201ENST00000438684 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
MSL3P1-201ENST00000438684 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
MSL3P1-201ENST00000438684 NACADO15069 1562 aa13.99□□□□□ -0.17
MSL3P1-201ENST00000438684 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
MSL3P1-201ENST00000438684 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
MSL3P1-201ENST00000438684 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
MSL3P1-201ENST00000438684 WIZO95785 1651 aa13.76□□□□□ -0.21
MSL3P1-201ENST00000438684 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
MSL3P1-201ENST00000438684 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
MSL3P1-201ENST00000438684 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
MSL3P1-201ENST00000438684 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
MSL3P1-201ENST00000438684 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
MSL3P1-201ENST00000438684 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
MSL3P1-201ENST00000438684 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.24
MSL3P1-201ENST00000438684 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 EEA1Q15075 1411 aa13.5□□□□□ -0.25
MSL3P1-201ENST00000438684 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
MSL3P1-201ENST00000438684 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
MSL3P1-201ENST00000438684 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
MSL3P1-201ENST00000438684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
MSL3P1-201ENST00000438684 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
MSL3P1-201ENST00000438684 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
MSL3P1-201ENST00000438684 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
MSL3P1-201ENST00000438684 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
MSL3P1-201ENST00000438684 SOGA1O94964 1423 aa13.37□□□□□ -0.27
MSL3P1-201ENST00000438684 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
MSL3P1-201ENST00000438684 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
MSL3P1-201ENST00000438684 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
MSL3P1-201ENST00000438684 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
MSL3P1-201ENST00000438684 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
MSL3P1-201ENST00000438684 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
MSL3P1-201ENST00000438684 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.28
MSL3P1-201ENST00000438684 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
MSL3P1-201ENST00000438684 KIF21BO75037 1637 aa13.25□□□□□ -0.29
MSL3P1-201ENST00000438684 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
MSL3P1-201ENST00000438684 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
MSL3P1-201ENST00000438684 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
MSL3P1-201ENST00000438684 APLP2Q06481 763 aa13.2□□□□□ -0.3
MSL3P1-201ENST00000438684 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
MSL3P1-201ENST00000438684 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
MSL3P1-201ENST00000438684 CLIP1P30622 1438 aa13.18□□□□□ -0.3
MSL3P1-201ENST00000438684 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
MSL3P1-201ENST00000438684 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
MSL3P1-201ENST00000438684 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
MSL3P1-201ENST00000438684 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
MSL3P1-201ENST00000438684 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
MSL3P1-201ENST00000438684 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
MSL3P1-201ENST00000438684 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
MSL3P1-201ENST00000438684 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
MSL3P1-201ENST00000438684 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
MSL3P1-201ENST00000438684 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
MSL3P1-201ENST00000438684 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
MSL3P1-201ENST00000438684 MYT1Q01538 1121 aa12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 MIER1Q8N108 512 aa12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.34
MSL3P1-201ENST00000438684 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
MSL3P1-201ENST00000438684 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
MSL3P1-201ENST00000438684 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
MSL3P1-201ENST00000438684 KIF27Q86VH2 1401 aa12.92□□□□□ -0.34
MSL3P1-201ENST00000438684 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
MSL3P1-201ENST00000438684 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
MSL3P1-201ENST00000438684 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
MSL3P1-201ENST00000438684 CUX1P39880 1505 aa12.86□□□□□ -0.35
MSL3P1-201ENST00000438684 RRBP1Q9P2E9 1410 aaKnown RBP12.86□□□□□ -0.35
MSL3P1-201ENST00000438684 CFTRP13569 1480 aa12.82□□□□□ -0.36
MSL3P1-201ENST00000438684 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
MSL3P1-201ENST00000438684 CUX2O14529 1486 aa12.81□□□□□ -0.36
MSL3P1-201ENST00000438684 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
MSL3P1-201ENST00000438684 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
MSL3P1-201ENST00000438684 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
MSL3P1-201ENST00000438684 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
MSL3P1-201ENST00000438684 TIAM1Q13009 1591 aa12.71□□□□□ -0.38
MSL3P1-201ENST00000438684 IGF1RP08069 1367 aa12.7□□□□□ -0.38
MSL3P1-201ENST00000438684 ITGAEP38570 1179 aa12.69□□□□□ -0.38
MSL3P1-201ENST00000438684 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
MSL3P1-201ENST00000438684 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
MSL3P1-201ENST00000438684 RAB3GAP2Q9H2M9 1393 aa12.68□□□□□ -0.38
MSL3P1-201ENST00000438684 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
MSL3P1-201ENST00000438684 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms