RNA–Protein interactions for RNA: ENST00000330514.4

GJC1-201, Transcript of gap junction protein gamma 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GJC1, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJC1-201ENST00000330514 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
GJC1-201ENST00000330514 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
GJC1-201ENST00000330514 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
GJC1-201ENST00000330514 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
GJC1-201ENST00000330514 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
GJC1-201ENST00000330514 NACADO15069 1562 aa15.46■□□□□ 0.07
GJC1-201ENST00000330514 ABCC9O60706 1549 aa15.38■□□□□ 0.05
GJC1-201ENST00000330514 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
GJC1-201ENST00000330514 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
GJC1-201ENST00000330514 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
GJC1-201ENST00000330514 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
GJC1-201ENST00000330514 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
GJC1-201ENST00000330514 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
GJC1-201ENST00000330514 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
GJC1-201ENST00000330514 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
GJC1-201ENST00000330514 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
GJC1-201ENST00000330514 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.06
GJC1-201ENST00000330514 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
GJC1-201ENST00000330514 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
GJC1-201ENST00000330514 WIZO95785 1651 aa14.6□□□□□ -0.07
GJC1-201ENST00000330514 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
GJC1-201ENST00000330514 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
GJC1-201ENST00000330514 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
GJC1-201ENST00000330514 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
GJC1-201ENST00000330514 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
GJC1-201ENST00000330514 HMGXB3Q12766 1538 aa14.33□□□□□ -0.11
GJC1-201ENST00000330514 PRDM2Q13029 1718 aa14.33□□□□□ -0.12
GJC1-201ENST00000330514 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
GJC1-201ENST00000330514 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
GJC1-201ENST00000330514 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
GJC1-201ENST00000330514 EEA1Q15075 1411 aa14.17□□□□□ -0.14
GJC1-201ENST00000330514 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
GJC1-201ENST00000330514 KIF21BO75037 1637 aa14.08□□□□□ -0.16
GJC1-201ENST00000330514 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
GJC1-201ENST00000330514 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
GJC1-201ENST00000330514 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
GJC1-201ENST00000330514 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
GJC1-201ENST00000330514 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
GJC1-201ENST00000330514 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
GJC1-201ENST00000330514 CFTRP13569 1480 aa13.9□□□□□ -0.19
GJC1-201ENST00000330514 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
GJC1-201ENST00000330514 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
GJC1-201ENST00000330514 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
GJC1-201ENST00000330514 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
GJC1-201ENST00000330514 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
GJC1-201ENST00000330514 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
GJC1-201ENST00000330514 CUX1P39880 1505 aa13.75□□□□□ -0.21
GJC1-201ENST00000330514 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
GJC1-201ENST00000330514 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
GJC1-201ENST00000330514 PRXQ9BXM0 1461 aa13.71□□□□□ -0.22
GJC1-201ENST00000330514 HRCP23327 699 aa13.7□□□□□ -0.22
GJC1-201ENST00000330514 SOGA1O94964 1423 aa13.69□□□□□ -0.22
GJC1-201ENST00000330514 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
GJC1-201ENST00000330514 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
GJC1-201ENST00000330514 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
GJC1-201ENST00000330514 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
GJC1-201ENST00000330514 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
GJC1-201ENST00000330514 RUSC2Q8N2Y8 1516 aa13.62□□□□□ -0.23
GJC1-201ENST00000330514 CUL7Q14999 1698 aa13.6□□□□□ -0.23
GJC1-201ENST00000330514 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
GJC1-201ENST00000330514 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
GJC1-201ENST00000330514 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
GJC1-201ENST00000330514 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
GJC1-201ENST00000330514 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
GJC1-201ENST00000330514 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.24
GJC1-201ENST00000330514 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.24
GJC1-201ENST00000330514 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
GJC1-201ENST00000330514 CTTNBP2Q8WZ74 1663 aa13.51□□□□□ -0.25
GJC1-201ENST00000330514 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
GJC1-201ENST00000330514 CFAP43Q8NDM7 1665 aa13.49□□□□□ -0.25
GJC1-201ENST00000330514 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
GJC1-201ENST00000330514 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
GJC1-201ENST00000330514 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
GJC1-201ENST00000330514 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
GJC1-201ENST00000330514 TOPBP1Q92547 1522 aa13.43□□□□□ -0.26
GJC1-201ENST00000330514 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
GJC1-201ENST00000330514 CLIP1P30622 1438 aa13.42□□□□□ -0.26
GJC1-201ENST00000330514 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
GJC1-201ENST00000330514 CUX2O14529 1486 aa13.4□□□□□ -0.26
GJC1-201ENST00000330514 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
GJC1-201ENST00000330514 PCGF6Q9BYE7 350 aa13.39□□□□□ -0.27
GJC1-201ENST00000330514 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
GJC1-201ENST00000330514 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
GJC1-201ENST00000330514 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
GJC1-201ENST00000330514 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
GJC1-201ENST00000330514 ARHGAP35Q9NRY4 1499 aa13.32□□□□□ -0.28
GJC1-201ENST00000330514 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
GJC1-201ENST00000330514 IGF1RP08069 1367 aa13.32□□□□□ -0.28
GJC1-201ENST00000330514 TIAM1Q13009 1591 aa13.3□□□□□ -0.28
GJC1-201ENST00000330514 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
GJC1-201ENST00000330514 WDR62O43379 1518 aa13.29□□□□□ -0.28
GJC1-201ENST00000330514 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
GJC1-201ENST00000330514 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
GJC1-201ENST00000330514 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
GJC1-201ENST00000330514 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
GJC1-201ENST00000330514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
GJC1-201ENST00000330514 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
GJC1-201ENST00000330514 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
GJC1-201ENST00000330514 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
GJC1-201ENST00000330514 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms