Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ZNF736-201ENST00000355095 2098 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC104794.4-201ENST00000607181 446 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC008033.3-201ENST00000612531 1407 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC027139.2-201ENST00000615639 448 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AP000350.7-201ENST00000624923 8030 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 CYP24A1-202ENST00000395954 1438 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 RN7SKP37-201ENST00000364494 296 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 ACTBP12-201ENST00000435871 418 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 RPL5P26-201ENST00000438138 877 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC090954.1-201ENST00000445502 361 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC104164.4-201ENST00000483456 493 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC018926.2-201ENST00000611214 498 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC110741.3-201ENST00000611983 659 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC116165.3-201ENST00000614524 400 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC009093.6-201ENST00000622268 553 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AP003499.3-201ENST00000624680 857 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC105052.3-201ENST00000639209 1130 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC022182.3-201ENST00000529239 2167 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 AC092718.7-201ENST00000623577 1776 ntBASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYCE2Q6PIF2 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
SYCE2Q6PIF2 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
SYCE2Q6PIF2 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC9.33□□□□□ -0.92
SYCE2Q6PIF2 HK1-206ENST00000448642 3868 ntTSL 5 BASIC9.33□□□□□ -0.92
SYCE2Q6PIF2 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms