RNA–Protein interactions for RNA: ENST00000390683.7

RAD51B-201, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best) BASIC

Gene RAD51B, Length 922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-201ENST00000390683 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
RAD51B-201ENST00000390683 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
RAD51B-201ENST00000390683 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
RAD51B-201ENST00000390683 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
RAD51B-201ENST00000390683 FOXD1Q16676 465 aa21.92■■□□□ 1.1
RAD51B-201ENST00000390683 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
RAD51B-201ENST00000390683 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
RAD51B-201ENST00000390683 MSH5O43196 834 aa20.46■□□□□ 0.87
RAD51B-201ENST00000390683 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
RAD51B-201ENST00000390683 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
RAD51B-201ENST00000390683 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
RAD51B-201ENST00000390683 ADRA2BP18089 450 aa20.25■□□□□ 0.83
RAD51B-201ENST00000390683 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
RAD51B-201ENST00000390683 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
RAD51B-201ENST00000390683 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.56
RAD51B-201ENST00000390683 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
RAD51B-201ENST00000390683 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
RAD51B-201ENST00000390683 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
RAD51B-201ENST00000390683 ABCC9O60706 1549 aa17.78■□□□□ 0.44
RAD51B-201ENST00000390683 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
RAD51B-201ENST00000390683 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
RAD51B-201ENST00000390683 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
RAD51B-201ENST00000390683 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
RAD51B-201ENST00000390683 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
RAD51B-201ENST00000390683 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
RAD51B-201ENST00000390683 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
RAD51B-201ENST00000390683 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
RAD51B-201ENST00000390683 NACADO15069 1562 aa17.46■□□□□ 0.39
RAD51B-201ENST00000390683 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
RAD51B-201ENST00000390683 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
RAD51B-201ENST00000390683 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
RAD51B-201ENST00000390683 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
RAD51B-201ENST00000390683 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
RAD51B-201ENST00000390683 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
RAD51B-201ENST00000390683 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
RAD51B-201ENST00000390683 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
RAD51B-201ENST00000390683 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
RAD51B-201ENST00000390683 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
RAD51B-201ENST00000390683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.296e-7■□□□□ 9.9
RAD51B-201ENST00000390683 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAD51B-201ENST00000390683 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
RAD51B-201ENST00000390683 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
RAD51B-201ENST00000390683 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
RAD51B-201ENST00000390683 KCNA4P22459 653 aa16.41■□□□□ 0.22
RAD51B-201ENST00000390683 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
RAD51B-201ENST00000390683 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
RAD51B-201ENST00000390683 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
RAD51B-201ENST00000390683 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
RAD51B-201ENST00000390683 DSG3P32926 999 aa16.34■□□□□ 0.21
RAD51B-201ENST00000390683 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
RAD51B-201ENST00000390683 CAPN15O75808 1086 aa16.31■□□□□ 0.2
RAD51B-201ENST00000390683 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
RAD51B-201ENST00000390683 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
RAD51B-201ENST00000390683 WIZO95785 1651 aa16.19■□□□□ 0.18
RAD51B-201ENST00000390683 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
RAD51B-201ENST00000390683 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
RAD51B-201ENST00000390683 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
RAD51B-201ENST00000390683 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
RAD51B-201ENST00000390683 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
RAD51B-201ENST00000390683 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
RAD51B-201ENST00000390683 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
RAD51B-201ENST00000390683 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
RAD51B-201ENST00000390683 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
RAD51B-201ENST00000390683 POTEHQ6S545 545 aa16.01■□□□□ 0.15
RAD51B-201ENST00000390683 ABCB7O75027 752 aa15.98■□□□□ 0.15
RAD51B-201ENST00000390683 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
RAD51B-201ENST00000390683 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
RAD51B-201ENST00000390683 APLP2Q06481 763 aa15.83■□□□□ 0.12
RAD51B-201ENST00000390683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
RAD51B-201ENST00000390683 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
RAD51B-201ENST00000390683 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
RAD51B-201ENST00000390683 CFTRP13569 1480 aa15.66■□□□□ 0.1
RAD51B-201ENST00000390683 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
RAD51B-201ENST00000390683 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
RAD51B-201ENST00000390683 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
RAD51B-201ENST00000390683 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
RAD51B-201ENST00000390683 NESP48681 1621 aa15.55■□□□□ 0.08
RAD51B-201ENST00000390683 POLA2Q14181 598 aa15.54■□□□□ 0.08
RAD51B-201ENST00000390683 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
RAD51B-201ENST00000390683 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
RAD51B-201ENST00000390683 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
RAD51B-201ENST00000390683 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
RAD51B-201ENST00000390683 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
RAD51B-201ENST00000390683 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
RAD51B-201ENST00000390683 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
RAD51B-201ENST00000390683 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
RAD51B-201ENST00000390683 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
RAD51B-201ENST00000390683 CUX1P39880 1505 aa15.33■□□□□ 0.04
RAD51B-201ENST00000390683 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
RAD51B-201ENST00000390683 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
RAD51B-201ENST00000390683 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
RAD51B-201ENST00000390683 TOP2BQ02880 1626 aa15.31■□□□□ 0.04
RAD51B-201ENST00000390683 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
RAD51B-201ENST00000390683 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
RAD51B-201ENST00000390683 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
RAD51B-201ENST00000390683 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
RAD51B-201ENST00000390683 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
RAD51B-201ENST00000390683 TOPBP1Q92547 1522 aa15.27■□□□□ 0.03
RAD51B-201ENST00000390683 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
RAD51B-201ENST00000390683 WDR62O43379 1518 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms