RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
CSGALNACT1-203ENST00000454498 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
CSGALNACT1-203ENST00000454498 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
CSGALNACT1-203ENST00000454498 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
CSGALNACT1-203ENST00000454498 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
CSGALNACT1-203ENST00000454498 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
CSGALNACT1-203ENST00000454498 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
CSGALNACT1-203ENST00000454498 APLP2Q06481 763 aa15.82■□□□□ 0.12
CSGALNACT1-203ENST00000454498 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
CSGALNACT1-203ENST00000454498 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
CSGALNACT1-203ENST00000454498 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CSGALNACT1-203ENST00000454498 ABCC9O60706 1549 aa15.56■□□□□ 0.08
CSGALNACT1-203ENST00000454498 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
CSGALNACT1-203ENST00000454498 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
CSGALNACT1-203ENST00000454498 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
CSGALNACT1-203ENST00000454498 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
CSGALNACT1-203ENST00000454498 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.05
CSGALNACT1-203ENST00000454498 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
CSGALNACT1-203ENST00000454498 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
CSGALNACT1-203ENST00000454498 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
CSGALNACT1-203ENST00000454498 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
CSGALNACT1-203ENST00000454498 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
CSGALNACT1-203ENST00000454498 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
CSGALNACT1-203ENST00000454498 PELP1Q8IZL8 1130 aaKnown RBP15.02□□□□□ -0.01
CSGALNACT1-203ENST00000454498 ITGAEP38570 1179 aa14.95□□□□□ -0.02
CSGALNACT1-203ENST00000454498 HRCP23327 699 aa14.95□□□□□ -0.02
CSGALNACT1-203ENST00000454498 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
CSGALNACT1-203ENST00000454498 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
CSGALNACT1-203ENST00000454498 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CSGALNACT1-203ENST00000454498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
CSGALNACT1-203ENST00000454498 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CSGALNACT1-203ENST00000454498 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
CSGALNACT1-203ENST00000454498 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
CSGALNACT1-203ENST00000454498 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
CSGALNACT1-203ENST00000454498 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CSGALNACT1-203ENST00000454498 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
CSGALNACT1-203ENST00000454498 FBLN2P98095 1184 aa14.57□□□□□ -0.08
CSGALNACT1-203ENST00000454498 NACADO15069 1562 aa14.56□□□□□ -0.08
CSGALNACT1-203ENST00000454498 NEFLP07196 543 aa14.55□□□□□ -0.08
CSGALNACT1-203ENST00000454498 P3H3Q8IVL6 736 aa14.54□□□□□ -0.08
CSGALNACT1-203ENST00000454498 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
CSGALNACT1-203ENST00000454498 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
CSGALNACT1-203ENST00000454498 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
CSGALNACT1-203ENST00000454498 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.1
CSGALNACT1-203ENST00000454498 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
CSGALNACT1-203ENST00000454498 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
CSGALNACT1-203ENST00000454498 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
CSGALNACT1-203ENST00000454498 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
CSGALNACT1-203ENST00000454498 MYT1Q01538 1121 aa14.34□□□□□ -0.11
CSGALNACT1-203ENST00000454498 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
CSGALNACT1-203ENST00000454498 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
CSGALNACT1-203ENST00000454498 BAZ1BQ9UIG0 1483 aaKnown RBP14.29□□□□□ -0.12
CSGALNACT1-203ENST00000454498 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
CSGALNACT1-203ENST00000454498 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.12
CSGALNACT1-203ENST00000454498 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
CSGALNACT1-203ENST00000454498 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
CSGALNACT1-203ENST00000454498 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
CSGALNACT1-203ENST00000454498 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
CSGALNACT1-203ENST00000454498 EEA1Q15075 1411 aa14.23□□□□□ -0.13
CSGALNACT1-203ENST00000454498 CLIP1P30622 1438 aa14.22□□□□□ -0.13
CSGALNACT1-203ENST00000454498 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
CSGALNACT1-203ENST00000454498 MROH2BQ7Z745 1585 aa14.16□□□□□ -0.14
CSGALNACT1-203ENST00000454498 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
CSGALNACT1-203ENST00000454498 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
CSGALNACT1-203ENST00000454498 ANP32CO43423 234 aa14.12□□□□□ -0.15
CSGALNACT1-203ENST00000454498 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
CSGALNACT1-203ENST00000454498 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
CSGALNACT1-203ENST00000454498 MTUS2Q5JR59 1369 aa14.09□□□□□ -0.15
CSGALNACT1-203ENST00000454498 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
CSGALNACT1-203ENST00000454498 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
CSGALNACT1-203ENST00000454498 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
CSGALNACT1-203ENST00000454498 TONSLQ96HA7 1378 aa14.03□□□□□ -0.16
CSGALNACT1-203ENST00000454498 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
CSGALNACT1-203ENST00000454498 SOGA1O94964 1423 aa14.01□□□□□ -0.17
CSGALNACT1-203ENST00000454498 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
CSGALNACT1-203ENST00000454498 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
CSGALNACT1-203ENST00000454498 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
CSGALNACT1-203ENST00000454498 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
CSGALNACT1-203ENST00000454498 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
CSGALNACT1-203ENST00000454498 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
CSGALNACT1-203ENST00000454498 WIZO95785 1651 aa13.92□□□□□ -0.18
CSGALNACT1-203ENST00000454498 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
CSGALNACT1-203ENST00000454498 BCANQ96GW7 911 aa13.91□□□□□ -0.18
CSGALNACT1-203ENST00000454498 CUX2O14529 1486 aa13.91□□□□□ -0.18
CSGALNACT1-203ENST00000454498 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
CSGALNACT1-203ENST00000454498 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
CSGALNACT1-203ENST00000454498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSGALNACT1-203ENST00000454498 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
CSGALNACT1-203ENST00000454498 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
CSGALNACT1-203ENST00000454498 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
CSGALNACT1-203ENST00000454498 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
CSGALNACT1-203ENST00000454498 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
CSGALNACT1-203ENST00000454498 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
CSGALNACT1-203ENST00000454498 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
CSGALNACT1-203ENST00000454498 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
CSGALNACT1-203ENST00000454498 CLSPNQ9HAW4 1339 aa13.83□□□□□ -0.2
CSGALNACT1-203ENST00000454498 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
CSGALNACT1-203ENST00000454498 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
CSGALNACT1-203ENST00000454498 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
CSGALNACT1-203ENST00000454498 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms